Campylobacter gracilis: CGRAC_0952
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Entry
CGRAC_0952 CDS
T04020
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgra
Campylobacter gracilis
Pathway
cgra03420
Nucleotide excision repair
cgra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGRAC_0952
03430 Mismatch repair
CGRAC_0952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgra03400
]
CGRAC_0952
Enzymes [BR:
cgra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGRAC_0952
DNA repair and recombination proteins [BR:
cgra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGRAC_0952
MMR (mismatch excision repair)
Other MMR factors
CGRAC_0952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
DUF6845
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AKT92402
LinkDB
All DBs
Position
942461..944521
Genome browser
AA seq
686 aa
AA seq
DB search
MSDILEGLNPTQREAASHVDGAMLILAGAGSGKTKTITARLAYLLSNGVPPGNTLTLTFT
NKAATEMRSRALNLISGLNLSGVPLLCTFHKFGLLFLKFHISELGRSANFQVIDTDDKKK
IIKGFEINLPTSLLAAKISTYKNSLIGPKDIDELLKGEEDELSRMYSGFYAHCADAYKRY
EAYLAANNLVDFDDLLILPYKILSANERLCDEISRRYVYITVDEYQDTNDIQFKLLQKLC
AAHENLVVVGDDDQSIYGWRGARIENILNFKDQFSNVKFIKLEQNYRSTDEILSAANELI
SHNKNRLGKSLTSMNGGGEKIEILRSDEESIEAAKIAEAIKKLLSSGVAPSQIAVLYRVN
ALSRALEEGLNRAKIPYKMVGGVKFYERAEIKDTIAYLRLVNDEHDDFSMRRIINVPKRG
IGKVSLAKLEELSRLRLISLFDAFSEPDAGLSAKAAQALAELKSGIASISALADTIKKIE
ALEPTFGLKAYYASLPDGADRVANIDEFLAMLKDEASNKPDFDLAEFLNELSLLSDQDAI
MGDAINIMSVHASKGLEFEHLFVIGLEEGFFPLLGDSNDIEEERRLAYVAITRAKRTLTL
SFAASRFYRGKRERLDASRFIAEAGLVAKEPPREQSSGFSKGELIKHKLFGIGQITAVNG
DRLTINFGGISRVIMSNFVEKIGSYE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatattttagagggtcttaatcctactcagcgcgaggctgcgagccacgtggat
ggagcgatgctaatcttagcgggtgctggtagcggcaaaactaaaacgatcaccgcgcgt
cttgcctatctgctatcaaacggcgtgcctccgggaaatactctcacgcttacgtttacg
aacaaagccgccaccgagatgcgctcgcgagcgcttaatctgataagcgggttaaattta
agcggagtgccgcttctgtgcacatttcataaattcgggcttttgtttttgaaatttcat
attagcgagcttgggcgcagcgcaaacttccaagtaatcgataccgacgataagaaaaag
atcatcaagggctttgagataaatttgcccacatcgctattggcagctaaaatttcaact
tacaaaaattctctaatcggccccaaagatatcgacgagcttctaaagggcgaagaggac
gagctaagcaggatgtatagcggattttacgcgcattgcgctgatgcatataagcgctac
gaggcgtatttggcggcgaataatcttgtagatttcgatgatctgctgatattgccgtat
aaaattttaagcgccaatgagcggctatgcgatgaaatttcgcgccgttacgtctatatc
acggtggatgagtatcaggacaccaacgacattcaattcaaactgctgcaaaagctttgt
gccgcgcacgaaaacctcgtggtggtgggtgatgacgatcagagtatctacggctggcgc
ggcgcacggatagaaaatatcttaaattttaaagatcagttctcaaacgtaaaatttatc
aaactcgagcagaattaccgctccacagatgaaattttatctgctgccaacgagctcatc
tcgcataacaaaaaccgcctcggcaagagccttactagcatgaacggcggcggcgaaaag
atcgaaattttgcgttcagacgaggagagtatcgaggcggcaaagatcgcagaagctatc
aaaaagctactttcaagcggagtagcgccctctcaaatcgccgtgctttaccgcgtaaac
gctctgtcgcgcgcgctggaagaggggctgaatcgcgccaaaatcccgtataaaatggta
ggcggcgtgaaattttacgagcgcgccgagatcaaggatacgatcgcctatctgcgctta
gtaaacgacgagcacgacgacttttcgatgaggcggatcataaacgtgcccaagcgcggc
atcggcaaggtctcgctggcaaagctcgaggagctttcgcgcctgcgactcatcagtcta
tttgatgcgtttagtgagcctgatgcggggcttagcgccaaggcggcgcaggctctagcg
gagcttaaaagcggcatcgcttctatttccgcactagccgatactatcaaaaaaatagag
gcgctagagcccactttcgggctaaaggcttactacgcctcgcttccggacggcgccgat
cgggtagcgaacatcgacgagtttttagctatgctaaaggacgaagctagcaataaaccc
gattttgatctggcggaatttttaaacgagctaagccttcttagcgatcaggacgccatc
atgggcgatgcgataaacataatgagcgtgcatgctagcaaagggcttgagttcgagcat
cttttcgtaatcgggctggaggaggggtttttcccgcttttgggcgacagcaatgacatc
gaggaggagcgcagactcgcatacgtagcgattacgcgcgccaagcgcacgcttacgctt
agctttgctgctagccgcttttatcgcggcaagcgcgagaggctggacgctagcaggttt
atagccgaggcgggtttggtagccaaagagccgccgcgcgagcaaagtagcggctttagc
aagggcgagctgatcaaacacaaactctttggtatcggacagatcacggcggtaaacggc
gaccgactcactataaatttcggcggaatttcgcgcgtgataatgtcaaatttcgtagaa
aagatcggctcttatgaatag
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