Campylobacter gracilis: CGRAC_1181
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Entry
CGRAC_1181 CDS
T04020
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgra
Campylobacter gracilis
Pathway
cgra03420
Nucleotide excision repair
cgra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGRAC_1181 (rep)
03430 Mismatch repair
CGRAC_1181 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgra03400
]
CGRAC_1181 (rep)
Enzymes [BR:
cgra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGRAC_1181 (rep)
DNA repair and recombination proteins [BR:
cgra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGRAC_1181 (rep)
MMR (mismatch excision repair)
Other MMR factors
CGRAC_1181 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
ResIII
DEAD
DUF7079
Motif
Other DBs
NCBI-ProteinID:
AKT92628
LinkDB
All DBs
Position
1218400..1220454
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AA seq
684 aa
AA seq
DB search
MAPFCKGIILDALAKLNTEQYAAATAPAGHNLVIASAGTGKTSTIVARIAHLLNLGTSPR
KILLLTFTNKAASEMIARLQRHFDKKITSAIVAGTFHAVSYALLRELGKGVILKQPAELK
TLLKSLVERRKFYHVSDTRPYGGAYLYDVYSLYQNKEMSADFATWFSKNYEDQAEFAEIY
ADILREFEEEKAKFNYADFNDVLLKMRRELQKGAPLRFDEILVDEYQDTNSLQGSLIDAF
ATKSLFCVGDFDQSIYAFNGANIDIIGSFGKRFADAKIYALNINYRSSSAILALANRVIA
NNPRLYEKKLIVGREGKFSAPRLHVYDDTAAQYAHVAAQIAQSGVPREKIAVIFRNNSSA
DGVEVALKELGIGAKRKGGVSFFESREIKVFTDIFAMIINPKDMMAFMSTCEYARGVGSA
LSKELFDALIALGHGSIHAGLLRPDESVKIFEKKRKNYQLGLFDDVDIIGSVSRFEALEF
DEFFRSHPVLKHNKITEGGAVFLHEIYKIFKKSGSATRSATLISQIKNSCLFSLVADFIA
TKRATLKNGKIDDERKKDEISRIYDKCGILEQIAGKYADPQSFYNFITLGAKEMSEGEGV
NLLSVHASKGLEFCSVYLIDLAQNRFPNLKLMAMGGSLEEERRLFYVAVTRARDELVLSY
AKFDKIRKVSYEPSCFLREAGLVK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctttttgcaaaggaataatcttggacgctctagctaagctaaacaccgaacaa
tacgccgcagcaaccgctcctgcggggcacaatctagtaatcgcaagcgcaggcacgggc
aaaaccagcaccatcgtcgctcggattgctcatctgctaaatctcggcacgagtcctaga
aaaattttgcttcttacttttacgaataaagccgcgagcgagatgatagcgaggctgcag
cggcattttgataaaaaaatcacctccgcaattgtcgcgggcacctttcacgccgtatcc
tacgccctacttcgcgagctgggcaagggcgtgatcctaaagcagcccgccgagctaaag
acgctgctaaaaagcctcgtagaaaggcgcaaattttatcacgtaagcgacacgcgcccc
tacggcggggcgtatctgtacgacgtgtactcgctgtatcaaaacaaagagatgagcgcg
gattttgcgacgtggtttagcaaaaactacgaggatcaggcggaatttgccgaaatttac
gcagatattttgcgcgagtttgaagaggaaaaggcgaaatttaactacgccgatttcaac
gacgtattgctaaagatgcgccgcgagctgcaaaagggcgcgccgctgcggtttgatgaa
attttagtggacgagtatcaggacacgaactcgctgcaaggaagcctcatcgatgccttt
gcgacgaaaagccttttttgcgtcggcgattttgatcagagcatctatgctttcaacggc
gcaaacatcgacatcatcggcagcttcggcaagcgctttgcggacgctaaaatttacgcg
ctgaatatcaactaccgctcaagctcggcgattttagcgcttgcaaatcgcgtcatcgcg
aacaatccgcgcctttacgaaaagaagctgatcgtgggccgcgagggaaaatttagcgcg
cctaggctgcatgtttacgacgatacggcggcgcaatacgcccacgtagccgcacagatc
gcacaaagcggagtgccgcgcgaaaagatcgccgtcatctttcgcaacaactccagcgcc
gacggcgtcgaggtcgcgcttaaggagctcggtataggcgcaaagcgaaaaggcggcgtg
agcttttttgaaagccgcgagatcaaggtctttacggacatcttcgcgatgataataaac
ccaaaagatatgatggcctttatgagtacgtgcgaatacgcaagaggcgtcggcagcgcg
ctaagcaaggagcttttcgacgcattaatcgcgcttgggcacggaagcattcacgcaggg
cttttgcgccccgatgagagcgttaaaatttttgaaaaaaagaggaaaaactaccagctc
ggactttttgacgatgtggatattatcggctcggtatcgcgctttgaggctttggaattt
gatgagttttttcgctcgcatccggtgctaaaacacaataaaatcaccgagggcggcgcc
gtatttttgcacgaaatttataaaatttttaaaaaaagcggctccgctacaaggtccgct
acgctgatctcgcagatcaaaaactcatgccttttctcgcttgtggcggatttcatcgcg
acaaagcgcgcgacgctaaaaaacggcaagatagacgatgagcgcaaaaaggatgagatc
tcccgcatctacgataaatgcggcattttagagcagatcgccggtaaatacgcggatccg
cagagcttttataatttcataactctgggcgcaaaggagatgagcgagggcgaaggggta
aatctgctcagcgtgcacgcaagcaaggggcttgagttttgcagcgtctatctcatcgat
ctggcgcaaaaccgcttcccgaacctcaagctaatggcgatgggcggcagcctagaggag
gagcggcggctcttttacgtggcggttaccagagcgcgcgacgagcttgtgctaagctac
gcgaaatttgataagatcagaaaagttagctacgagccgagctgctttttaagggaagcg
gggctggtgaagtaa
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