Campylobacter gracilis: CGRAC_1599
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Entry
CGRAC_1599 CDS
T04020
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cgra
Campylobacter gracilis
Pathway
cgra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGRAC_1599 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgra03021
]
CGRAC_1599 (rpoC)
03400 DNA repair and recombination proteins [BR:
cgra03400
]
CGRAC_1599 (rpoC)
Enzymes [BR:
cgra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGRAC_1599 (rpoC)
Transcription machinery [BR:
cgra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGRAC_1599 (rpoC)
DNA repair and recombination proteins [BR:
cgra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGRAC_1599 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AKT93027
LinkDB
All DBs
Position
complement(1656880..1661394)
Genome browser
AA seq
1504 aa
AA seq
DB search
MSDNSNLERIEIKEDARVHDFDAFAIRLASPEQIKAWSHGEVKKPETINYRTLKPERDGL
FCAKIFGPVRDYECICGKYKKMRYKGWKCEKCGVEITSSKVRRTRMGHIELVTPVAHIWY
VNSLPSRIGTLLNIKMKDLERVLYYEAYIVESAGEAFYDNENSKKVEKYDVLNEEQYQSL
KERFSQTGFVAKMGGQVIRDMLAELDLVEILNSLKEEMANTNSEAKKKTIVKRLKVVESF
LNSGNKPEWMMITNLPVLPADLRPLVSLEGGKFAVSDVNDLYRRVINRNSRLKRLMELDA
PEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRV
DFSGRSVIVVGPNLRMDQCGLPKTMALELFKPHLIARLQEKGYATTVKQAKKMIENRINE
VWECLEEVVKDHPVMLNRAPTLHKMSIQAFHPVLVEGKAIRLHPLVCAAFNADFDGDQMA
VHVPLSQEAIAECKILMLSSMNILLPASGKPVAVPSQDMVLGIYYLSLEKPGAKGTNKIF
ANVDEVMLAVEANALDIHAKIKTMIDRRIIFTTAGRLIIKSILPSFIPDHLWNKIMKKKD
IAELVDYVYKNGGLEISAEFLDNLKNLGFESATKAGVSISVSDIIVPKSKPGLVEEAKKQ
VREVQNQYGAGLLTDGERYNKTIDIWTSTSKKLADEMMKMMEKDKDGFNSIYMMADSGAR
GSAEQIKQLAGMRGLMSKPDGSIIETPITSNFREGLNVNEYFISTHGARKGLADTALKTA
NAGYLTRKLIDVAQNVRITMHDCGTHEGIEVTEIVENGTQIESLADRIMGRVLSSDVIDP
VSNEILFTEGMLLGVNEVRTIVDAGIKSVSIRTPITCKAEKGVCAKCYGVNLGEGKLVKP
GEAVGIISAQSIGEPGTQLTLRTFHAGGTASTEQQDRQVIADKEGFIRYYNVKTYENGGK
NIVMNRRNAAVLLVEPKIKAPITGKVSIDITHDDVNITLKGKKEEFKYTIRRHDLAKPTE
LAGVSGKVEGKFYIVFKDGETVGENDSLVEVIKEDWNIPTRIPFASELRVKDGEPVTQKI
KAGANGTLKYFILKGDYLERLRDIKKGHVVSEKGMYVVISDENGREAIRHYIPRESVITY
DDNSVVKSDDLIAKPKKDDRLIIAEWDPYSIPVAAECEGKISFEDIEPGYTATEQYDETT
GQSRLVINEYLPQGVKPAIIVTPSKGEPIKYNLGPKTAIFTDKGDQVAIADILARTPKAA
AKSKDITGGLPRVSELFEARRPKNTAIIADIDGTVRFDKALRAKERIVIEGEDGTSAEYL
IDKSRQIQVRNGEFVHAGEKLTDGVISSHDVLRILGEKALHYYLISEIQQVYRSQGVVIS
DKHIEIIVSQMLRQVRIVDSGDTQLIVGDLISRRRFREENERIMKIGGEPAIAESVLLGV
TRAAVGSDSVISAASFQETTKVLTEASIAGKFDRLEDLKENVILGRIIPVGTGLYKDKEV
KLKK
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataattcaaatttagaaagaatagaaataaaagaggacgccagagttcacgac
ttcgacgcgtttgctatcaggcttgctagtcccgagcagatcaaggcttggagccacggc
gaggtcaaaaagcccgaaaccatcaattaccgcacgcttaagccggagcgcgacggactt
ttttgcgctaaaattttcggccccgtaagagattatgagtgcatctgcggtaaatataaa
aagatgcgttataagggctggaaatgcgaaaagtgcggcgtcgagatcacgagctcgaag
gttcgccgtactagaatggggcatattgagctagtaacgccggtagcacatatttggtac
gtaaattccttgcctagccgcatcggtacgctgctaaatatcaagatgaaagatcttgag
cgcgtgctttactatgaggcgtatatcgtagaaagtgcaggcgaggcgttttacgataac
gaaaattctaaaaaggtcgagaaatacgatgttttaaatgaggagcagtatcagagccta
aaagagcgtttttcgcagacgggcttcgtcgccaaaatgggcggtcaggtgatccgcgat
atgctagccgagcttgatttagttgaaattttaaattctttgaaagaggagatggctaat
acaaactccgaagcgaagaaaaaaactatcgtcaagcgcctaaaggttgtcgagagcttt
ttaaattccggcaataagcccgagtggatgatgattacaaatctgcccgtgctacctgca
gatctgcgtccgcttgtaagccttgagggcggaaaattcgcagtttctgacgtaaatgat
ctatatcgccgcgtcataaatcgaaattctagacttaaaaggctgatggagctcgacgcg
cccgagatcatcatccgcaatgaaaaacgaatgcttcaagaggcggtggatgcgcttttt
gacaacggacgtcgtgccaatgccgtaaagggcgccaataagcgaccgcttaaatcccta
agcgagatcattaagggtaaacaaggtcgcttccgtcaaaatttacttggcaagcgcgtg
gatttttcgggccgctccgtcatcgtcgtaggtccaaatttacgcatggatcagtgcggt
ctgcctaagacgatggcgcttgagttattcaagccgcatctaatcgctcgcctgcaagag
aagggctatgcaacgaccgttaagcaggctaaaaagatgattgaaaataggatcaatgaa
gtttgggagtgcttggaggaggtcgttaaagatcacccggtcatgctaaaccgcgcgccg
acgcttcataagatgtctattcaagcgtttcatccggtgctcgtcgagggcaaggcgatc
agactgcatccgctagtctgcgccgcgtttaacgcggacttcgacggcgatcagatggcg
gtgcacgtgccgcttagccaagaggcgatcgcggaatgtaaaattttaatgcttagctcg
atgaacatcttgcttcctgcgagcggaaagccagtcgcggtgcctagccaggatatggtt
ttaggaatttattatctaagcctcgaaaagccgggcgcaaaaggaacaaataaaattttt
gcaaacgttgatgaagtaatgctcgccgtagaggcaaacgcgctagatatccacgccaaa
atcaaaacgatgatcgatcgccgcattatctttacgaccgcggggcgcttgatcatcaaa
tcgatcctgcctagctttattccggatcatctttggaataagatcatgaagaagaaggat
attgccgagcttgtcgattacgtctataaaaacggcggccttgagataagcgcggaattt
ttggataatcttaaaaatttaggctttgaatccgcgactaaagcgggcgtttcgatctcc
gtttcggatatcatcgtgccaaagtccaagcctggtcttgtcgaagaggctaaaaagcag
gtgcgagaggttcagaatcaatacggcgcaggcttgctaaccgacggcgagcgctataac
aaaacgatcgacatctggaccagcaccagcaagaagctagccgatgagatgatgaagatg
atggagaaggataaggacggctttaactcgatctatatgatggcggatagcggcgcgcga
ggtagcgcggagcagatcaaacagctagcgggtatgagaggcctgatgagtaagccggac
ggctcgatcatcgagacgccgattacttcaaattttagagagggtctgaatgtaaacgag
tacttcatctcgacccacggcgctcgtaaaggtcttgccgatacggcgcttaagaccgca
aatgcgggatatctaacgcgaaagctgatcgatgttgcgcaaaatgtcaggattacgatg
catgactgcggtacgcacgagggtatcgaggttaccgagatcgtagaaaacggaactcag
atcgaaagcctagccgataggattatgggtagggtgctaagctcggatgtaattgatccg
gtgtcgaatgaaattttattcaccgaaggtatgcttctaggcgttaatgaggtacgcacc
atagtcgatgccggcatcaaatccgtaagcatccgtacgcctattacgtgtaaggctgaa
aaaggggtttgtgcaaagtgctacggtgtaaatttaggcgagggcaagctggtaaaaccg
ggtgaagcggtcggtatcatatcggcgcaatcaatcggcgagccgggcacgcagcttacg
ctacgaaccttccacgccggcggtaccgcatctaccgagcagcaagatcgccaagtaatc
gccgataaagagggctttatcagatattacaacgtaaagacctacgaaaacggcggcaaa
aatatcgtgatgaaccgcagaaatgccgcggtgcttttggtcgagcctaagatcaaagcc
ccaattaccggcaaagtaagcatcgatataacccacgatgatgtgaatatcacgctaaag
ggcaagaaggaagaatttaaatataccatccgccgccatgatctagccaagcctaccgag
cttgcgggcgtaagtggtaaagttgaggggaaattctacatcgtatttaaagacggcgaa
accgttggagaaaatgatagtttagtagaagttataaaagaagactggaatatccctact
cgaattccgtttgccagcgaacttcgcgttaaagacggcgagccggtaacccaaaagatc
aaagcgggagcaaatggtacgcttaagtatttcatcctaaagggcgattatttagagagg
ttaagagatatcaaaaaaggtcacgtcgtaagtgagaaaggtatgtacgtagtcatctcc
gatgaaaacggcagagaggcgatccgccactatataccgcgcgaatctgtcattacctat
gatgataatagcgtcgtaaaaagcgatgatcttatagctaagcctaaaaaagacgatcga
ttgatcattgcggagtgggatccgtattccatcccggtagctgcagagtgtgagggtaag
atcagctttgaggatatcgagcctggatataccgctacggagcaatatgacgagactaca
ggtcaaagccgtttagttatcaacgagtatctacctcagggcgtcaaaccggctatcatc
gtaactcctagcaagggagagcctatcaaatataatctagggccgaagactgcgattttt
acggacaagggcgatcaggtagcgattgcagatattttggctaggacgccgaaagctgct
gcgaaatcaaaagatatcactggcggtttgccgcgcgtatcggagctatttgaggcgcgc
cgtccaaaaaatactgcgattatcgcagacatcgacggaaccgtccgctttgataaggcg
ctacgtgcaaaagagcgcattgtaatcgagggcgaagacggaacgagtgccgagtatcta
atcgataagagtcgccagatccaggtgcgaaacggcgagttcgtccacgcgggagagaag
cttaccgacggagttatcagctcgcacgacgtgcttagaattttaggcgaaaaggcgctg
cattattatctgataagcgaaattcaacaggtttatcgctctcaaggcgtcgtcattagc
gacaaacatatcgagattatcgtatctcagatgctccgccaggtccgaattgtcgatagc
ggcgatactcagctaatcgtcggtgatctcattagccgccgcagatttagagaagaaaac
gagcgcattatgaaaattggtggtgaacctgcgatcgctgagtccgtactgctgggcgta
actcgcgccgcagtaggaagcgatagcgtcatttcggcagcgtctttccaagagactacg
aaggttttaacggaggctagcattgcgggtaaatttgaccgattggaggacttaaaagaa
aacgtcatcctaggtcgcataattccggtcggaaccggtctgtataaagataaggaagtt
aaacttaaaaaataa
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integrated database retrieval system
