Campylobacter gracilis: CGRAC_1865
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Entry
CGRAC_1865 CDS
T04020
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cgra
Campylobacter gracilis
Pathway
cgra03030
DNA replication
cgra03430
Mismatch repair
cgra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGRAC_1865 (dnaE)
03430 Mismatch repair
CGRAC_1865 (dnaE)
03440 Homologous recombination
CGRAC_1865 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgra03032
]
CGRAC_1865 (dnaE)
03400 DNA repair and recombination proteins [BR:
cgra03400
]
CGRAC_1865 (dnaE)
Enzymes [BR:
cgra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGRAC_1865 (dnaE)
DNA replication proteins [BR:
cgra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGRAC_1865 (dnaE)
DNA repair and recombination proteins [BR:
cgra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGRAC_1865 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AKT93280
LinkDB
All DBs
Position
complement(1918721..1922866)
Genome browser
AA seq
1381 aa
AA seq
DB search
MSDYTHLHLHTEYSLLDGANKVSELAELLQSRGTKACAITDHGNMFGAIDFYQTMKKHGI
KPIIGIETYLHNHDDIGDKSDRQRYHLILLAKNETGYKNLMYLSSRAFLDGFYYYPRINK
KILKEHSEGLICSSACLAGEVEFHLNRSERNLKRGAGGYEAAKKAALEYKEIFGEDFYLE
IMRHGIGEQLNVDKDLIRLSREIGVKIIATNDAHYSRKDRAKAHDVYQCISMGKTINDGD
RLKHVVSEFYVKSDEEMRRLFADIPEVIENTAEIVQKCNLKFAFDEKDYAPTPPNFKFTI
EYAARLGLSLPQPDERYSFANDDFLFDHLCREGLKERLKFIDPAKHEIYRERLEKELAII
KNMHFSGYMVIVQDFINWAKDHDIPVGPGRGSAAGSICAYALRITDLDPIPYNLLFERFL
NPSRISMPDIDVDFCQARRGEVIDYVIDQYGKFNVAQVATFGKLLARGVIRDVARVCDMP
LSQADKMAKLIPDKLGITLTQAYDAEPKLKEFIDADPIAQQVWEFALGLEGLNRNAGMHA
AGVVISNEPLWNKAPLFKQDKGEDARLVTQYTKNYLEDVDLIKFDFLGLKNLDVIDNAAK
LVKRRYGRDIVWEEIDFNDRKTYETIQSGNTLGIFQIEGAGMQDLAMNLRPDRFEDIIAM
ISLYRPGPMDLIPDFIRIKHGELKASYIFPELKEILEPTYGIIVYQEQVMQIVQKVGGFS
LGDADLVRRAMGKKDEKKLAHMREQYLSGAKELGFDVAKADELFDLIMKFASYGFNKSHA
AAYSMITFQTAYLKTYYPAEFMAALLTSEEGNTDKISKYIDEASRLGIGLLPPSINQSLR
GFSVVDDENSKSGTSIIYGLGAIKGVGAAAIENILELQSEAKFQSIDDFASRVDNFRVNK
KVIESLIYAGAMDCLGKSRLAMIQNMENILEVMKKITEIKKDAASSLFGEDEDMTSGMSV
SFVDTDKEFPQGEILKFEQQTVGVYLSGHPLDDYKEEIEGIDYTLSSAFSEIEGDSAEVL
SVGRIEDLSTRMTKTGKKMGILNVLDLHGSFELAVFDNALKAIENLSPQERERPYAFMIK
ISKSAVGGAAYQLSFLSMMSLQNARDASFRPHAGVFLSENPLKAYAAQLGAIAHTKSNEF
DELAGDEDASVKILCVGKIENVHTRTTKSGKQMANLTVLDLAGSFEMSAFGDICDAVTAL
TDAELERPMAFWARLSKNTSPYGGKFQIYLDEILTLDAAQNIDGYVPSKMRGFGGREREG
FSGSNFGSGRNFGGERGGGYGSGNFTERRGSVAAEDPALKARKEREAQRKNAQDFEFELS
LGELSREKIYKIYHLAFCDTALKNTKRLILRIRNGSEVLVYPTEYIVSDNFTEKVREIIA
A
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactacacccacctgcaccttcacaccgagtattcgctgctagacggcgcgaat
aaagtaagcgagctcgccgagcttttgcagagccgcggcaccaaggcgtgcgcgatcacc
gatcacggcaatatgttcggcgcgatagacttttatcaaacgatgaaaaagcacggcatc
aagccgatcatcggcatcgagacctacctgcacaaccacgacgatatcggcgataaaagc
gaccgccagcgctatcacttgatactgcttgccaaaaacgagacgggctataaaaatctg
atgtatcttagctcgcgcgcatttctggacggcttctactactacccgaggatcaacaaa
aaaattttaaaagagcacagcgaggggctcatctgctcctcggcatgcctagcgggcgag
gtggaatttcatctaaatagaagcgagcgaaatttaaagcgcggtgcgggcggctacgaa
gcggcgaaaaaagcggcgcttgagtataaggaaattttcggcgaggatttttatcttgag
atcatgcgccacggcatcggcgagcaattaaacgtcgataaagacctcatccgcctttcg
cgcgaaatcggcgtcaagatcatcgctaccaacgacgctcactactcgcgcaaggaccgc
gccaaggctcacgacgtctatcagtgcatctcgatgggcaagacgatcaacgatggcgac
cgcctaaaacacgtcgtttcggaattttacgtaaaaagcgatgaggagatgaggcggctt
tttgcggacatccccgaagtgatcgaaaataccgccgagatcgtgcaaaagtgcaatctg
aaatttgccttcgacgagaaagactatgcgcccacgccgccgaattttaaatttacgatc
gaatacgccgctaggctcgggctttcgctgccccagcctgatgagcgatatagctttgca
aacgatgattttttattcgatcatctgtgtcgcgaggggcttaaagagcgccttaaattt
atcgatcctgctaagcacgaaatttatcgcgagcgcctggaaaaggagcttgccatcatc
aaaaacatgcatttttcgggctatatggtcatcgtgcaggatttcatcaactgggcgaag
gaccacgacatcccggttggccccggtcgcggttctgcggcgggcagcatctgcgcgtat
gcgcttcgcattaccgacctcgatccgatcccgtataatctgcttttcgagcgattttta
aatccgtcgcgtatctcgatgcccgacatcgacgtggatttttgccaggcacgcagaggc
gaggtgatcgactacgtcatcgatcagtacggcaaatttaacgtcgcgcaggttgcgacc
ttcggtaagctgctcgcgcgcggcgtcatccgcgacgtggctcgcgtctgcgatatgccg
ctttcgcaggccgataagatggcaaagctgatccccgataagctcggcatcacgcttacg
caggcttacgatgccgagccgaagctgaaggaatttatcgatgcagatccgatcgcgcag
caggtttgggagtttgcgctgggccttgaagggctcaatcgcaacgcgggcatgcatgcc
gcgggcgttgtgatttcaaacgagccgctgtggaataaagcgccgctatttaagcaagat
aagggcgaggacgcgcgcctggtcacgcaatacaccaaaaactatcttgaagatgtcgat
ctgataaaatttgacttcctgggtctaaaaaacctcgatgtgatcgataatgccgctaag
cttgtcaagcgccgctacggtcgcgatattgtctgggaggagatcgatttcaacgaccgt
aagacctacgagacgattcaaagcggcaacacgctggggatcttccaaatcgagggcgcg
ggcatgcaggatctggcgatgaacctgcgcccggaccgcttcgaggatatcatcgcgatg
atctcgctctaccgcccgggaccgatggatctaatccccgattttatcaggatcaaacac
ggcgagctaaaagctagctatatcttccctgagctaaaagaaattttagagccaacatat
ggcatcatcgtctatcaagagcaggttatgcagatcgtgcagaaggtgggcggctttagt
ttgggcgatgccgatctggtgcgccgcgcgatgggtaaaaaggatgaaaagaagcttgcc
cacatgcgcgagcagtatctaagcggcgctaaagagctgggctttgacgtagcaaaagca
gatgagctatttgatctgattatgaaatttgcctcctatggctttaacaaatcccacgcc
gcggcgtattcgatgatcacctttcaaacggcctatcttaagacctactatccggcggag
tttatggcggcgctgcttacttcggaggagggcaataccgataaaatttcaaaatatatc
gacgaggctagccgcctaggcatcgggcttttgccgccgtcgatcaatcaaagcttaaga
ggctttagcgtcgtggacgacgaaaattccaaatcgggcacctcgatcatctacggcctc
ggcgcgatcaagggcgtgggcgccgccgcgatcgagaatatcttagagcttcaaagcgag
gctaaatttcaaagcatcgacgattttgcttcgcgagtggacaatttccgcgtcaataaa
aaggtcatcgagtcgctgatctatgcaggcgcgatggattgcctgggtaagagtcgcttg
gcgatgattcaaaacatggaaaatatccttgaggtaatgaaaaaaatcaccgagattaaa
aaggacgccgctagctcgctttttggcgaggatgaggatatgacgagcggcatgagcgta
agtttcgtcgataccgataaggaatttccgcagggcgaaattttaaaatttgagcagcag
accgtgggcgtgtatctttcgggacatccgctagatgattataaagaggagatagagggc
atcgactacacgctatcctcggcgtttagcgagatcgagggcgatagcgccgaggtgctt
agcgtggggcggatcgaggatctatccacgcgcatgacgaaaacgggcaaaaaaatgggg
attttaaatgtgcttgatctgcacggcagcttcgagcttgcggtgttcgataacgcgcta
aaggcgatcgaaaacttaagcccgcaggagagggagcgcccgtacgcttttatgattaaa
atttcaaaaagtgcggtcggcggcgcggcgtatcagctgtcgtttctttcgatgatgagc
ttgcaaaacgctcgagatgcgagcttccgtccgcacgcgggagtatttttgagcgagaat
ccactcaaagcctacgccgcgcagcttggcgcgatcgcgcataccaaatcgaacgaattt
gacgaactggcgggcgacgaggacgcgagcgttaaaattttatgcgtcggcaagatcgaa
aacgtccacacccgcacgaccaaatcgggcaagcagatggcaaatctcacggtgctcgat
cttgcgggcagcttcgagatgagtgcgttcggcgatatttgtgatgcggtcactgcgcta
acggatgcggagctggagcgcccgatggcgttttgggcacggcttagcaaaaatacatcc
ccttacggcgggaaatttcaaatttatctggatgaaattttaactctagatgccgcgcaa
aatatcgacggctacgtgcctagtaagatgcgaggcttcggcggtagggagcgtgagggc
tttagcggcagcaatttcggctccggcagaaacttcggtggtgaacgaggcggcggctac
ggcagcgggaatttcacggagcgaaggggcagtgttgctgcggaggatcccgctcttaag
gcgcgcaaagagcgcgaggcacagcgcaaaaacgcgcaggatttcgagtttgagctaagc
ttaggcgaacttagccgcgagaaaatttataaaatttaccacctcgccttttgcgacacg
gcgctgaaaaacaccaagcggctgattctgcggatccgcaacggcagcgaagtgctcgtt
tatccgaccgaatacattgtgagcgataatttcaccgaaaaggtgcgcgaaatcatcgcg
gcgtag
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integrated database retrieval system
