Campylobacter gracilis: CGRAC_2112
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Entry
CGRAC_2112 CDS
T04020
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cgra
Campylobacter gracilis
Pathway
cgra03410
Base excision repair
cgra03430
Mismatch repair
cgra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CGRAC_2112 (recJ)
03430 Mismatch repair
CGRAC_2112 (recJ)
03440 Homologous recombination
CGRAC_2112 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgra03400
]
CGRAC_2112 (recJ)
DNA repair and recombination proteins [BR:
cgra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CGRAC_2112 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CGRAC_2112 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CGRAC_2112 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Response_reg
Motif
Other DBs
NCBI-ProteinID:
AKT93507
LinkDB
All DBs
Position
2196730..2198310
Genome browser
AA seq
526 aa
AA seq
DB search
MLGKNEIREILKSRFANDRHTKISEIPLPCDLKDTYKAALRIKTAIEENQRIAVVGDYDV
DGIVSTVIMSDFFNQIGAEYVIKIPNRFTDGYGLNSEIIGELEDVDLIITVDNGTSATEA
AEICAQKGIDLIITDHHMPPPVLPRAYAIINPKQPDCTFPNIEICGAQVAWYLVGALKET
LGVNYDMASSMDILIIAIIADMMELRDMNRALLRFGIKRLNSSNRACFKAIKEHYFKKHF
EFDDISYTIAPLINCTGRMDDATMSYNFLCAKNIREANHYLETINSINNSRKEEEKSLYD
EIVKSVDPNDNVIVVWGPQWHEGIIGIVASRLSKTYKKPAIVFSVSDSRAKGSARSIGKF
DILELISSQSEILTTFGGHKGAAGVGIDPALLQEFKRRVNERITPKDLSDFSAQDDLLGE
LDASQIDFELLEILEFYEPYGQKNPRPLFCIKGARARNIREIGKEGKHIKMALDKNGGSV
EALFFNYDFLPRAGERVDVIFTISKNNFRGTITPELIIKELAPSES
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgctaggtaaaaatgagataagggaaattctaaaatcgagatttgcgaacgatcggcat
actaaaatttctgaaattcccttaccctgcgatctgaaagatacctataaggcggctttg
cgcataaaaactgccatcgaagaaaaccagcgcatagccgtagtcggcgattatgacgtc
gacggtatcgtaagcaccgtcataatgagcgattttttcaatcaaataggcgcggagtac
gtcattaagatcccgaaccgcttcaccgacggatacgggctaaacagcgagatcataggc
gagcttgaggatgtagatctcatcatcaccgtagataacggcacctccgcgacggaagcc
gccgaaatttgcgcccaaaaggggatcgatctcatcatcaccgatcatcacatgcccccg
cccgtgctgccaagagcttatgcgataatcaatccgaagcagcctgactgcaccttccca
aatatcgaaatttgcggcgcgcaggtagcgtggtatctcgtaggcgcgctaaaagaaacc
ctcggcgtgaactacgatatggcaagctcgatggatatcctcatcatcgccataatcgcc
gatatgatggagctgcgcgacatgaaccgcgcgcttttgcgcttcggtatcaagcggcta
aatagctcaaaccgcgcctgcttcaaggcgattaaagagcattattttaaaaagcacttc
gaattcgacgatatcagctacacgatcgcgccgcttatcaactgcacggggcgtatggac
gatgcgacgatgtcgtataactttttatgcgccaaaaatattagagaggcgaaccactac
ctagagacgataaattccatcaacaactcgcgcaaagaggaggagaaaagcctctacgac
gagatcgtaaaaagcgtcgatccgaacgacaacgtcatcgtcgtgtggggtccgcagtgg
cacgaaggcatcatcggcatcgtcgcaagccgcctaagcaagacctacaaaaagcccgcg
atcgtctttagcgtaagcgactcgcgcgccaaagggagcgcgcgcagcatcggtaaattc
gacattttagagctgatctcctcgcaaagcgaaattttaacgaccttcggcggacacaag
ggcgctgcgggcgtgggaatcgatcctgcgctgcttcaggagtttaagcggcgcgtaaat
gagcgcattacgcctaaggatctgagcgattttagcgcgcaagacgatctgctgggcgag
ctggacgcgtcgcagatagacttcgagctgcttgaaattttagaattttacgagccgtac
gggcagaaaaatcctcgcccgctcttttgtatcaaaggcgcgcgtgcccgcaatatcagg
gagatcggcaaggagggcaagcatatcaaaatggcgcttgataaaaacggcggcagcgtc
gaggcgctgttttttaactacgactttttgccgcgcgcgggcgagcgggtcgacgtgatc
tttacgattagcaaaaacaacttccgcggcacgatcacgccagagctcatcatcaaggag
ctagctccgagcgaaagctaa
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