Cutibacterium granulosum: 4412665_00056
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Entry
4412665_00056 CDS
T05425
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cgrn
Cutibacterium granulosum
Pathway
cgrn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgrn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
4412665_00056 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgrn03021
]
4412665_00056 (rpoC)
03400 DNA repair and recombination proteins [BR:
cgrn03400
]
4412665_00056 (rpoC)
Enzymes [BR:
cgrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
4412665_00056 (rpoC)
Transcription machinery [BR:
cgrn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
4412665_00056 (rpoC)
DNA repair and recombination proteins [BR:
cgrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
4412665_00056 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
SNV27697
UniProt:
A0A239VZP2
LinkDB
All DBs
Position
1:complement(48562..52443)
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AA seq
1293 aa
AA seq
DB search
MLDTNYYDRLQIGLATADQIRQWSYGEVKKPETINYRTLKPERDGLFCEKIFGPTKDWEC
YCGKYKRVRFKGIICERCGVEVTRSNVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAYMITAVDEEARHRDLPSLEAKVQAEKTHMAQRRDSELEARRAKLEED
LAQLEAEGAKADTRRKVKDGAEKELRQIEHRGQRQIDRLDAVWERFKTLKVQDLEGDEVL
YREMRSRFGKYFEGSMGAEAVKRRLADFDLQAESESLRETIKTGRGQKKTRALKRLKVVQ
AFLDSGNSPAGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVSGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKMHQCGLPKTMALELFKPFVMKRLADLEHAQNVKSAKRMVERQR
PVVWDVLEEVIKEHPVLLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCSAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSTNNILKPADGRPVALPSHEMIIGAYYLTMALDGRKGEGR
VFTSLSEAIMAHDLGELEVGAKIKMRFHDMVPPVGKELRPDGSILLDTTLGQAIFNEVLP
KDYPYVDYLVGKKQIGKIVNDLSERMTQLEVAHILDNLKDIGYDWGSLSGVTVSIGDVQT
PPTKPQILAGYEKRAAKVDKEYERGAVTEEERRQDLIQIWTEATAELTEAMEANFTRTNP
IYMMVHSGARGNMTQMRQIAAMRGLVADTKGDIIPRPIKSNFREGLTVLEYFISTHGGRK
GQADTALRTADSGYLTRRLVDVSQDVIVRDDDCGTTRGMPKTIAVDDGSGNLVPADGLET
AVYARCLAADAVDANGNVVLEANSDLGDEQIRRLIAAGITQIKVRSVLTCAAPEGCCARC
YGRSLSTGKLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVVELFEA
RSPKGKAPIAEASGVVRLEESDSRRKLILVRDDGEEDVEYTLPRRARLEFDFGGRHVVIR
DGARVEAGQQLTAGTLDPHDVLRVMGVRKVQEHLVGEVQKVYATQGAPIHEKHIEIVIRQ
MLRRITVIDSGDTTMMPGELADRPLYEAANRTAVAEGGRPAEGRPVLMGITKASLATESW
LSAASFQETTKVLTDAAINGKTDTLVGLKENVILGKLIPAGTGLERYRNMRVEPTAEAKA
AAFTMNYDPFDYDFGSGSGASVALDDLDFGDLG
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacacgaactactacgaccgcctccagatcggcctggcgaccgctgaccagatt
cgccagtggagctacggcgaggtcaagaaacccgagaccatcaactaccgcaccctcaag
ccggagcgcgacggtctgttctgcgagaagatcttcgggcccaccaaggactgggagtgc
tactgcggcaagtacaaacgcgtgcgcttcaagggcatcatctgtgagcggtgtggcgtg
gaggtcactcgctccaatgtgcgtcgtgagcgcatgggccacatcgagctggccgccccg
gtcacccacatctggtacttcaagggtgtgccgtcgcggctgggctacctgctcgacatc
gcccccaaggacctcgagaaggtcatctacttcgcggcctacatgatcaccgcggtcgac
gaggaggcccgtcaccgcgacctgccgagcctcgaggcgaaggtgcaggccgagaagacc
cacatggcccagcgccgcgactccgagctggaggctcgtcgagcaaagctcgaggaggat
ctcgctcagctggaggccgagggggccaaggccgacacccgccgcaaggtcaaggacggt
gccgagaaggagctgcgtcagatcgagcatcgcggtcagcgccagatcgaccgtctcgac
gccgtctgggagcggttcaagaccctcaaggtccaggatctcgagggtgacgaggtgctc
taccgtgagatgcggtcgcggttcggcaagtacttcgagggctccatgggagccgaggcc
gtcaagcgtcggctggccgacttcgacctgcaggccgagtcggagagcctgcgtgagacc
atcaagaccggacgcggtcagaagaagactcgtgccctcaagcgtctcaaggtggtgcag
gccttcctcgattccggcaactccccggcgggcatggtgctggactgcgtgccggtgatt
ccaccggacctgcgcccgatggtccagctggacggtggccgattcgccacctccgacctc
aacgacctctaccgtcgcgtcatcaatcgcaacaaccgtctcaagcggctgctcgatctc
ggggcccccgagatcatcgtcaataacgagaagcgcatgctccaggaagccgtggactcg
ctgttcgacaacggtcgtcgcgggcgcccggtctccgggccgggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctcaagatgcaccag
tgcggtctgcccaagacgatggccctggagctgttcaagccgttcgtcatgaagcgtctg
gccgacctcgagcacgcacagaacgtcaagtccgccaagcggatggtcgagcgtcagcgc
ccggtggtgtgggacgtcctcgaagaggtcatcaaggagcacccggtgctgctcaaccga
gcaccaacgctgcaccgtctgggcatccaggccttcgagccgctgctcatcgagggcaag
gccatccagctgcacccgctggtctgctcggccttcaacgccgacttcgacggtgaccag
atggccgtccacctgccgttgagtgccgaggcccaggccgaggctcgggtgctcatgctc
tcgaccaacaacatcctcaagccggctgacggccgaccggtcgccctgcccagccacgag
atgatcattggtgcctactacctgacgatggccctggacggccgcaagggggaggggcga
gtcttcacctcgctgtccgaggcgatcatggcccacgatctcggtgaactcgaggtgggg
gccaagatcaagatgcgcttccacgacatggttccgccggtgggcaaggagctgcgcccg
gacggctccatcctgctcgacaccaccttgggtcaggcgatcttcaacgaggtgctgccc
aaggactacccctacgtcgactatctcgtcggcaagaagcagatcggcaagatcgtcaac
gacctctccgagcggatgacccagctcgaggtggcccacatcctcgacaacctcaaggac
atcggctacgactggggctcgctgtccggtgtgaccgtgtccatcggtgacgtgcagacc
ccgccgaccaagccgcagatcctggcgggctacgagaagcgggctgccaaggtcgacaag
gagtacgagcgtggtgccgtcacagaggaggaacggcgtcaggacctcatccagatctgg
acggaggccactgccgagctcaccgaggcgatggaggccaacttcacccgcaccaacccc
atctacatgatggtgcactccggtgcccgtggaaacatgacccagatgcgtcagatcgcc
gccatgcgtggtctggtggccgacaccaagggcgacatcattccccgacccatcaagtcg
aacttccgtgagggcctcacggtgctggagtacttcatctccacccacggtggccgaaag
ggtcaggccgacaccgctctgcgtaccgcggactccggttacctcacccgtcgtctggtt
gacgtctcccaggacgtcatcgtgcgtgacgacgactgtggcaccacccgcgggatgccc
aagacgattgccgtcgacgacggttcgggcaacctcgtgccggccgatggcctggagacg
gcggtctacgcccggtgcctggcagccgacgccgtcgacgccaatggcaatgtcgtcctg
gaggccaactccgacctgggcgatgagcagattcgcaggctcatcgccgctggcatcacc
cagatcaaggtgcgttcggtgctgacctgtgccgctcccgaggggtgctgcgcccggtgc
tacggccggtcgctgtccaccggcaagctggtcgacgtcggtgaggccgtgggcatcatc
gccgcccagtcgattggtgagcccggtacccagctgacgatgcgtaccttccacaccggt
ggtgtggccggtgacgacatcacccaggggctgccgcgtgtcgtcgagctcttcgaggcc
cgttcccccaagggcaaggcgccgatcgccgaggcctccggtgtcgttcgtctggaggag
tccgactcccggcgcaagctcatcctcgtgcgtgacgacggtgaggaggatgtggagtac
accctgccacgtcgcgcacgtctggagttcgacttcggtggccggcacgtcgtcattcgc
gatggtgcacgggtggaggctggacagcagctcaccgccggtaccctcgacccccacgat
gtgttgcgcgtcatgggtgtgcgcaaggtccaggagcacctggtcggtgaggtccagaag
gtgtacgccacccagggcgccccgatccacgagaagcacatcgagatcgtcattcgccag
atgctgcgccgtatcacggtgatcgactccggcgacacgacgatgatgcccggtgagctg
gcggaccgtccgctctatgaggctgccaaccgtaccgccgtcgccgagggtggtcgtccc
gccgagggccgcccggtgctcatgggcatcaccaaggcatccctggccaccgagtcgtgg
ctgtcggccgcgtccttccaggagacgacgaaggtgctcaccgatgccgcgatcaacggc
aagaccgacaccctcgtcggtctcaaggagaacgtcatcctcggtaagctcatcccggcc
ggtaccggactggagcgctaccgcaacatgcgtgtggagccgacggcagaggccaaggca
gcggcgttcaccatgaactacgacccgttcgactacgatttcggatccggctcgggagcc
tcggtggccctggacgatctcgatttcggagacctcggttga
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integrated database retrieval system
