Cutibacterium granulosum: 4412665_01448
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Entry
4412665_01448 CDS
T05425
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cgrn
Cutibacterium granulosum
Pathway
cgrn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
4412665_01448 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgrn03400
]
4412665_01448 (recD)
Enzymes [BR:
cgrn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
4412665_01448 (recD)
DNA repair and recombination proteins [BR:
cgrn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
4412665_01448 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
UvrD-helicase
PhoH
AAA_22
nSTAND3
UvrD_C
SH3_13
SLFN-g3_helicase
TraI_hel_assoc_N
AAA
NPHP3_N
Mg_chelatase
AAA_25
STPRs
Jag_N
Motif
Other DBs
NCBI-ProteinID:
SNV37012
UniProt:
A0A239WRH0
LinkDB
All DBs
Position
1:1692261..1694189
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AA seq
642 aa
AA seq
DB search
MSTDVVPISASPTLATLCTAGVLSAADIHLATMVCRLCHESEESVRLALALTSRELRHGS
VFLNPRTIRETILTQLDDPALRGLMDEQTAAAIEQVEQMTWPDPDHWMLTLQRSPAIADR
RSASNARPARLDSDRLYLERYWLDEQTVATRLAHLAHEKTSITDEQCRQVLDEVQETIQR
PHFQLDEFQVDAVRAAATHNVSVLSGGPGTGKTTMVCIILAVLASADPHLGRIALSAPSG
KAASRLRDAVTSTSHALGLRPLPTASQATTVHSLLGWQGPGSGFRYDKLNQLPYDVIVVD
EASMLSVSLMARLLDAIGARTRLILVGDPDQLVSVEAGSVLADIVASHGELGKADDGGED
SGLASEVLPVSKLTHNHRSGGAIAALAEAVQYEEHGKSLDDAVDEALEILTTSPDQISFI
DADPAETPLSSLPELQETIISTAQAVRQQATTGADDDALACADGHRLLCAHRLGPYGVAS
WSAQMVETLSLTLPGLGQGQWVVGETTMVTHNMRQFEVNNGDCGVIVQTSPVPTVALPGK
GNSSRRLPCSLLSTMFPLQAMTVHKSQGSQFDDVTVVLPPPDSALLTRELFYTAITRARR
HLTVMGTRESIRRAIGQPTQRNSGLKRQWQRMRQGGISSSDA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgatgtggttcccatctccgccagcccgaccttggcaacgttgtgcactgcg
ggcgtgctgtcggccgccgacatccatcttgcgacgatggtgtgccggctctgtcacgag
tccgaggaatcggtacgtctggccctggcattgaccagtcgcgaactgcgacacggatcg
gtctttctcaatccccggacgatacgcgagaccatcctcacccagctggacgatccggcc
ctgcgcggactgatggacgagcagactgctgctgcgatcgagcaggtggagcagatgacc
tggcccgatccggaccactggatgctgaccctgcagaggagtcctgcgatagctgatcga
agatctgccagcaacgcacgtcctgcccgactggactcagaccggttgtacctggaacgg
tactggctcgacgaacagaccgtggccacacgactcgcgcacctcgcccacgagaaaacc
tccatcaccgacgagcagtgccggcaggtgctcgacgaggtccaggagacgatacagcgc
ccacacttccagctcgacgagttccaggttgacgcggttcgagcggctgcaacgcacaat
gtcagcgttctgtccggcggccccggaaccggcaagacgaccatggtgtgcatcatcctc
gccgtgctggccagcgccgatccacatctgggccggatcgccctgtccgcgcccagtggc
aaggcggcaagtcgactgcgtgacgccgtgaccagcacatcccatgccctgggtctcagg
cccctgccaactgcctcacaggccaccacggtccactcactgctggggtggcaggggccg
ggcagtggattccggtacgacaagctcaaccagttgccctatgacgtcatcgtcgttgac
gaggcatcaatgctgtcggtatccctcatggctcgtctgctcgacgccatcggggcgcgg
acccggctgatcctcgttggtgacccggatcagctggtgtcagtcgaggctggatccgtc
ctggccgatatcgtcgcttcccatggtgagctgggcaaggcggatgacgggggcgaggac
agcgggctcgccagcgaggtgcttccggtgtccaaactcactcacaaccacagatctggc
ggtgccattgcagcactggccgaggcggtgcagtacgaggagcacgggaagagcctggac
gacgccgtcgatgaggcactggagatcctgaccaccagccctgaccagatctcgttcatc
gatgccgaccctgccgagacccccctgtcgagccttcccgagttgcaggaaaccatcatc
tccacagcacaggctgtccgccagcaggcaacgaccggtgcggatgacgatgcgctggca
tgtgccgatgggcaccgtctgctgtgcgcacaccgtcttggcccctatggggtggcgtcg
tggtcggcccagatggtcgagaccctgtcattgaccttgccgggactcgggcagggccaa
tgggtcgtgggcgagacgacgatggtgacgcacaacatgcgtcagttcgaggtcaacaat
ggtgactgtggtgtcatcgtccagacgtcgcccgttcccacggttgccctgccgggaaag
ggcaattcgagtcgtagactcccctgctccctgctgtcgaccatgtttccgctgcaggcc
atgaccgttcacaagtcccagggaagtcagttcgacgacgtcaccgtggtgttgccgcca
ccggactcggcactgctcacccgggaactcttctacaccgcgatcacccgagcacgacgg
catctgacggtcatggggacccgcgaatccattcgacgagccattggacagcccacgcaa
cgaaactccgggctgaaacgtcagtggcagcggatgaggcagggaggaatcagcagctcc
gacgcctga
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