Corynebacterium glutamicum SCgG1: C624_05380
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Entry
C624_05380 CDS
T02690
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cgs
Corynebacterium glutamicum SCgG1
Pathway
cgs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C624_05380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgs03019
]
C624_05380
03400 DNA repair and recombination proteins [BR:
cgs03400
]
C624_05380
Enzymes [BR:
cgs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C624_05380
Messenger RNA biogenesis [BR:
cgs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C624_05380
DNA repair and recombination proteins [BR:
cgs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C624_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_Cmi2_C
TrmB
Motif
Other DBs
NCBI-ProteinID:
AGN18661
LinkDB
All DBs
Position
1150270..1152321
Genome browser
AA seq
683 aa
AA seq
DB search
MNATREEANNLLAGIAGPGAQLRDDQWVAIDALVNQRKRMLVVQRTGWGKSAVYFIAAKL
LRARGSGAAVIISPLLALMRNQVASAERAGIKAATLNSANMTEWETIQQQVVSGDADVLL
ISPERLNNPDFRDTILPRLAAETGLVVVDEAHCISDWGHDFRPDYRRIRDLLAGLSPNIP
VLATTATANDRVVEDVRAQLGDRTGLLRGGLDRESLYLSVVNLPNPTERPAWLATHLKDL
TGSGIIYCLTVSAAHDLADALNSVGWNVAAYTGRTEAGERERLEHALINNEIKALVATSA
LGMGFDKPDLGFVVHMGSPSSPVSYYQQIGRAGRGTARADVILLPGTEDKEIWEYFASVS
FPREEVVRQLLAVLTDEAQSTVKLESQVDLSRSRLEQVLKVLDVDGAVKRVRGGWVSTRQ
EWIYDAERYAGLEQARKIEQQSMVNYQNTIECRMLYLRKELDDVEATTPCGRCDNCTGKT
WGLDTDASITLKVDQQLQTPGVKIAPRKMWPTGISVRGKIAGLEEGRALGRLNDIARGPA
LKALLDSGAYSDDPWMARIIEVLKNWGWTNRPANVVALGNTNFGSTEMIIQVAQSIAAVG
RMNFAGVLPVLPGAEEVMAQNSAYRVEALLKQWDWSKGLQLVPGPILLVTDLIDTGWSVT
VAGNGIAQRTSGKVLPFALASRG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaacgagggaagaagccaacaacttactagctggaatcgccggacctggcgca
cagctccgcgatgatcaatgggtagcaattgatgcattggtaaaccaacgcaaacggatg
ctggtggtgcaaaggaccggttggggtaaatcagccgtctacttcatcgccgccaaactg
ttaagagcacgcggttcgggcgcagccgtgattatttctccactactagccctcatgcgt
aaccaggtggcgtccgccgaacgtgccgggattaaggcagcgacactcaacagtgccaac
atgacggaatgggaaaccatccagcagcaagtcgtttcaggcgacgccgatgtgctgtta
atttcacctgaacgcctcaacaacccagactttagagacaccattttgcctcgactagca
gctgaaacaggcctagtggtggtcgatgaagcccactgtatttccgactggggtcacgat
ttccgccccgattatcgtcgcatccgcgaccttttagcaggactgtcgcccaatattccc
gtgctagcaaccacagcaacagctaatgaccgcgtggtagaagatgtccgtgcccaacta
ggagaccgcacaggtttgcttcgtggtggactagaccgtgaatccctttacctatccgtg
gtgaacctgcccaaccccaccgaacgaccagcttggcttgccacccacctcaaggatttg
actggttcgggcatcatttactgcctcaccgtatctgctgcacatgatcttgccgatgca
cttaattctgttggatggaatgttgccgcctacaccggtcgaaccgaagcaggagagcgc
gaacgtttagaacatgccttgatcaacaacgagatcaaagcactagtagcaacctctgca
ctgggaatgggctttgacaaacctgaccttggatttgttgtgcacatgggcagccccagc
tcaccggtgtcttattaccagcagattggtcgcgccgggcgcggcaccgctcgtgccgat
gtcatcctgctgccaggaactgaagacaaagagatctgggagtactttgcatcagtatcg
ttcccacgcgaagaggtagtccgccaactgcttgcggtgttaaccgatgaggcgcaatcc
actgtcaaattggaatcacaagtagatctttcccgatcacgccttgaacaagtacttaaa
gtgctagacgtagatggcgcagtcaaacgtgtacgtggcggatgggtctccaccaggcaa
gagtggatctacgatgcggaacgctacgcagggcttgaacaagcaaggaaaattgaacag
caaagcatggtgaactaccagaacaccattgagtgccgcatgctgtacctccgcaaagaa
ctagacgatgtggaggcaactactccgtgcgggcgctgtgacaattgcacgggcaaaacg
tgggggctcgacaccgatgcctcgatcactttgaaagtggaccaacagcttcaaacaccc
ggagtgaaaatagccccacgaaaaatgtggccgactggcattagtgtcagaggaaaaatc
gcagggctagaagaaggacgagcactgggacgactcaatgacattgcccgtggacctgca
ctaaaggccctgctggacagcggagcttattctgatgatccatggatggcacgcatcatc
gaagtgctgaaaaactggggttggaccaaccggcctgccaacgtggtcgcgctcggcaat
accaactttggatcaactgagatgatcatccaggtagctcaatcaatcgcagcggtggga
cgaatgaactttgcgggtgtacttccagtcctgcctggtgctgaagaagtcatggctcag
aattccgcataccgagtagaagccctattgaaacaatgggactggtcgaaaggcttgcaa
ctagttcccggtcccattttgctggtgacagaccttattgatactggctggtcggtgaca
gttgcaggaaatggcattgcgcagcggacctcagggaaggtgctgccgttcgctttagcg
agtaggggatag
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