Corynebacterium glutamicum R: cgR_0888
Help
Entry
cgR_0888 CDS
T00501
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgt
Corynebacterium glutamicum R
Pathway
cgt03420
Nucleotide excision repair
cgt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
cgR_0888
03430 Mismatch repair
cgR_0888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgt03400
]
cgR_0888
Enzymes [BR:
cgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
cgR_0888
DNA repair and recombination proteins [BR:
cgt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
cgR_0888
MMR (mismatch excision repair)
Other MMR factors
cgR_0888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
HHH
C1_1
Motif
Other DBs
NCBI-ProteinID:
BAF53861
UniProt:
A0AB72V9H6
LinkDB
All DBs
Position
979505..981541
Genome browser
AA seq
678 aa
AA seq
DB search
MINLQDLDEDQRIAASAPRGPVCILAGAGTGKTRTITYRIAHLIDQGFVSPNRVLAVTFT
SRAAGEMRHRLNLMGIGGVQARTFHAAARKQLLYFWPQVAGNLPWRLLDNKFQLVGRAVR
GARLESQTEKVRDILGEIEWAKASLITPEQYPDRLGTRTPPAPAEKIAEVYQRYENMKAT
PEGMLLDFDDLLLHTAGALENSPAVAEEFRQQYRSFVVDEYQDVTPLQQRVLDAWLGDRD
DLTVVGDANQTIYSFTGATPEYLLNFSRKYPEATVVKLQRDYRSTPQVTALANTVIGQAR
GRVAGTRLELQGMRIAGPEPEFSAFDDEPTEAREVAGRILTLLKNGVQASEIAVLYRINA
QSAVFEQALADAGIVYQVRGGEGFFTRPEIRQALSQLIRTSQRDVDESDLVRLTQRTLVP
LGLSSEEPSGAQERERWQSLNALVDLVKDLVKATPDLDLTGLLLKLRERQEAKHPPTVEG
VTLASLHAAKGLEWDAVFLVGLVDSTLPISHAIKSGDEAIEEERRLFYVGVTRAREHLHC
SWALARQEGGRKSRKRSRFLDGIVVEMASESGTPRSNRPKNCRVCGSVLSSPAEKAVGRC
ASCPIQADERVFEQLRTWRNDTAKRENKAAYMVFSNATLMAIAEMNPTNENELLSVPGVG
PMKIENYGDDVLAILGAL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaatttgcaggacctcgacgaggatcaacgcatcgctgcttctgcgcctcgcgga
ccagtgtgcattctcgccggagccggcacgggtaaaactcgaacgattacttatcgcatc
gcgcatctgattgatcagggttttgtgagcccgaatcgtgttcttgctgtgacgtttaca
tcccgcgcggcaggggagatgcgtcatcgcttgaatctcatggggatcggtggcgtgcag
gcaaggacattccacgcagcagcgaggaagcagttgttgtatttctggcctcaggtggcg
ggtaatctgccgtggcgcctgttggataataagtttcaacttgtgggtcgtgcggttcgt
ggtgcgcggttggaatcgcagactgaaaaagttcgcgatattttgggtgaaattgagtgg
gcgaaggcgtcgctgattacacctgagcagtatccagatcgtttgggtacgaggacccct
ccggcgcccgcggagaaaatcgctgaggtgtatcagcgatacgaaaacatgaaggcaacc
cctgaggggatgttgcttgatttcgacgatctgttgcttcacaccgccggcgcgttggag
aattccccggcagtggcggaggagttccgccagcagtatcgcagctttgtggtcgatgag
tatcaggatgtgacgcctctgcagcagcgggtgctcgatgcgtggctcggcgatcgcgat
gacctgacggttgtcggcgatgcgaaccagacgatttattcgttcacgggggcaacacct
gagtatttgcttaatttctcgaggaaatatccggaggcaaccgtcgtcaagctgcagcgc
gactaccgctcaacgccgcaggtcaccgcgctggccaataccgtcatcggccaggcgcgg
gggcgcgttgctggcacgcgcctagagcttcagggaatgcggatcgccgggccggagccc
gaattttcggctttcgacgacgaacccaccgaagcccgcgaagttgcgggccgcattttg
acgctgcttaaaaacggcgtccaggcctcagaaatcgccgttttgtaccgcatcaacgcg
cagtcggcggttttcgagcaagcgcttgccgacgccggcatcgtatatcaggtacgcggc
ggcgaaggctttttcacccgcccagaaattcgccaagccctgagtcaactgatccgcact
tcccaacgcgacgtcgatgaaagcgatctggtgcgtctgacgcaacgcacactcgtgcca
cttgggttgagttcggaagagcccagcggtgcccaagagcgggaacgctggcaatcgctc
aacgctttagtcgatctggtgaaagaccttgttaaagccacaccagatttggatctcaca
ggcttgctgctgaaacttcgggaacgccaagaggcgaagcatccgccgaccgtcgaaggt
gtcaccttggcatcgctacacgcggcgaaaggcctcgaatgggatgcggtgtttcttgtc
ggacttgtcgattccacgttaccgatcagccacgccattaaatctggcgatgaagcaatc
gaagaggaacgtcgcctgttctatgtcggtgtgacccgtgcccgcgaacacctccactgc
agttgggcactcgcgaggcaagaaggcggacggaaatcgagaaagcggagtcgattcctc
gatggcatagtcgtggagatggcctccgaatcgggcacacctcgcagcaatcgtccgaaa
aactgccgagtgtgcggatcggttctttcaagccctgccgaaaaagctgtcggtcggtgt
gcgagttgcccaatccaagcggatgaacgagtcttcgaacagctgcgaacgtggcgcaat
gacactgcgaagcgcgaaaacaaagcggcgtacatggtgttcagcaatgcaacgttgatg
gcgatcgctgaaatgaaccccaccaacgaaaacgaattgctcagcgtgccgggtgtgggg
ccgatgaagatcgagaactatggcgatgacgtcctcgcgattttgggagcactttag
DBGET
integrated database retrieval system
