Corynebacterium glutamicum K051: WA5_0472
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Entry
WA5_0472 CDS
T02508
Symbol
RpoC
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cgu
Corynebacterium glutamicum K051
Pathway
cgu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WA5_0472 (RpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgu03021
]
WA5_0472 (RpoC)
03400 DNA repair and recombination proteins [BR:
cgu03400
]
WA5_0472 (RpoC)
Enzymes [BR:
cgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WA5_0472 (RpoC)
Transcription machinery [BR:
cgu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WA5_0472 (RpoC)
DNA repair and recombination proteins [BR:
cgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WA5_0472 (RpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF496
Motif
Other DBs
NCBI-ProteinID:
CCH23693
LinkDB
All DBs
Position
516494..520495
Genome browser
AA seq
1333 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLDLIIYFGANIITSVDEEARHSDQTTLEAEMLLEKKDVEADAESDIAERAEKLEED
LAELEAAGAKADARRKVQAAADKEMQHIRERAQREIDRLDEVWQTFIKLAPKQMIRDEKL
YDELIDRYEDYFTGGMGAESIEALIQNFDLDAEAEELRDIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLNAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIEL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLRLHECGLPKLMALELFKPFVMKRLVENEYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTLEKSSEEFGGQ
GAYQPADENGPEKGVYSSLAEAIMAYDRGVLGLQAPVRIRLNHLRPPAEVEAEQFPDGWN
QGETWLAHTTLGRVMFNEILPWNYPYLEGVMVRKGGGSDKIMLGDVVNDLAAKYPMITVA
QTMDKMKDAGFYWSTRSGVTIAMSDVLVLPNKEEMLDRYEESARQIEVKYNRGKLTGRER
YDRLVELWKDATDEVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKGD
YITRPIKTSFREGLTVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRVED
CGTRQGVRVPVAAEVLDATGAVTGYTRHDLIETSVSGRVLAGDATNAAGEVVLAAGTDLT
ELNIDLLVEAGIKDVKVRSVLTCQTPTGVCAKCYGKSMASGQQVDIGEAVGIVAAQSIGE
PGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNCAPIASVEGVIHLEDEGNFYTLT
IVPDDGSDNVVYEKLSKRQGLASTRVAMESNAGAFIERTLTEGDRVTVGQRLLRGAADPH
DVLEILGRRGVEQHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGS
LVDLSEAKLANSEAIGAGGQPAELRSEIMGITKASLATEFWLSAASFQETTRVLTDAAIN
KRSDKLIGLKENVIIGKLIPAGTGISRYRNISIKPTEAARNAAYSIPTYGESIYGDDGFG
EFTGASVPLDEAF
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtaaacgtcttcgatgagctccgcatcggcctggccaccgccgacgacatc
cgccgttggtccaagggtgaggtcaagaagccggagaccatcaactaccgaaccctcaag
cctgagaaggacggtctgttctgcgagcgtatcttcggtccaactcgcgactgggagtgc
gcctgcggtaagtacaagcgtgtccgctacaagggcatcatctgtgaacgctgtggcgtt
gaggtcaccaagtccaaggtgcgccgtgagcgcatgggacacattgagctcgctgcacca
gtaacccacatttggtacttcaagggcgttccatcacgcctcggctaccttttggacctt
gctccaaaggacctggacctcatcatctacttcggtgcgaacatcatcaccagcgtggac
gaagaggctcgccacagcgaccagaccactcttgaggcagaaatgcttctggagaagaag
gacgttgaggcagacgcagagtctgacattgctgagcgtgctgaaaagctcgaagaggat
cttgctgaacttgaggcagctggcgctaaggccgacgctcgccgcaaggttcaggctgct
gccgataaggaaatgcagcacatccgtgagcgtgcacagcgcgaaatcgatcgtctcgat
gaggtctggcagaccttcatcaagcttgctccaaagcagatgatccgcgatgagaagctc
tacgatgaactgatcgaccgctacgaggattacttcaccggtggtatgggtgcagagtcc
attgaggctttgatccagaacttcgaccttgatgctgaggctgaagagctgcgcgacatc
atcaacaatggcaagggccagaagaagatgcgtgcactgaagcgcctgaaggttgttgca
gccttccagcgttccggcaacgatcctgccggcatggttttgaacgcgatcccagtgatc
ccaccagagcttcgcccaatggttcagcttgacggtggtcgcttcgctacctccgacttg
aacgacctttaccgtcgtgtgatcaaccgcaacaaccgtctgaagcgcatgattgagctc
ggtgcacctgagatcatcgtgaacaacgagaagcgcatgctgcaggaatctgtggacgcg
ctgttcgacaacggtcgtcgtggtcgcccagttaccggaccgggtaaccgtccgctgaag
tctctgtctgacttgctcaagggcaagcaaggccgtttccgtcagaaccttctgggtaag
cgtgttgactactctggtcgttccgtaattatcgttggtcctcagctgcgcctccacgaa
tgtggtctgcctaagctgatggctctcgagctcttcaagcctttcgtcatgaagcgcttg
gtggagaacgagtacgcacagaacatcaagtctgcaaagcgcatggttgagcgtcagcgc
cctgaggtgtgggacgtcctcgaagaggccatctctgagcacccagtgatgctgaaccgt
gcaccaaccctgcaccgcttgggcattcaggctttcgagcctgtccttgttgagggtaag
gctattcagctgcacccacttgcttgtgaagctttcaacgccgacttcgatggtgaccag
atggcagttcacctgccgctgtccgctgaagctcaggctgaggctcgcgtgctgatgctt
gcatccaacaacattttgtccccagcttccggtaagcctttggctatgcctcgtctggat
atggtgaccggtctgtactacctgactctggagaagtcttccgaggagttcggtggacag
ggcgcttaccagcctgcagatgaaaacggtcctgaaaagggcgtgtattcctcactggca
gaagcaatcatggcttatgaccgtggtgtacttggcctgcaggccccagttcgcatccgt
ttgaaccacctgcgcccaccagctgaggtagaagcagagcagttcccagatggatggaac
cagggcgagacttggttggctcacaccaccttgggtcgcgttatgttcaacgagatcctg
ccttggaactacccataccttgagggcgttatggtccgtaagggtggcggctccgacaag
atcatgcttggcgacgtagtcaatgacctcgctgctaagtacccaatgatcaccgtggct
cagaccatggacaagatgaaggatgctggcttctactggtcaacccgttccggtgtgacc
atcgctatgtctgacgttttggttcttcctaacaaggaagaaatgctggaccgctacgag
gaatctgcacgccagatcgaagttaagtacaaccgcggtaagctcaccggccgtgagcgc
tacgaccgtctggtcgagctgtggaaggacgcaactgacgaggttggacaggctgtcgag
gatctgtacccagacgacaacccaattccaatgatcgtgaagtctggtgctgccggtaac
atgcgtcagatctggacccttgctggtatgaagggcatggttgtgaactcgaagggtgac
tacatcacccgcccgatcaagacttccttccgtgaaggcttgaccgttctcgagtacttc
aacaactcccacggttcccgtaagggcctggccgataccgcgctgcgtaccgctgactcc
ggttacctgacccgtcgtcttgttgacgtcgctcaggacgtcatcgtgcgtgttgaggac
tgtggcacccgccagggtgttcgcgttcctgtcgctgctgaggttctggatgcaactggt
gctgtcaccggctacacccgccatgacctgatcgagacttctgtctccggtcgtgttctg
gctggcgatgcaaccaacgctgcaggcgaggttgtgcttgctgctggtaccgacctgacc
gagctcaacattgaccttctggtcgaggctggcatcaaggacgtcaaggttcgttccgta
cttacctgccagaccccaaccggtgtttgtgctaagtgctacggcaagtccatggcttcc
ggccagcaggttgatatcggagaggctgtcggtattgttgctgcacagtccattggtgag
cctggtacccagctgaccatgcgtaccttccaccagggtggtgtcggtggcgatattacc
ggcggtctgcctcgtgttcaggagctgtttgaggcacgtgttcctaagaactgtgcacca
attgcttctgttgaaggtgttatccaccttgaggatgaaggcaacttctacactctgacc
atcgttcctgacgatggctccgacaacgttgtctacgagaagctgtccaagcgacagggt
cttgcatccactcgcgtggctatggagtccaacgctggtgcgttcattgagcgcaccttg
accgaaggtgaccgcgtcaccgttggtcagcgtctgctccgtggtgcagctgatccacac
gacgtgctcgagatcctcggtcgccgtggtgtggagcagcacctcatcgatgaggtgcag
gctgtttaccgtgcacagggtgtggccatccacgacaagcacatcgaaatcatcattcgt
cagatgctgcgtcgcggtaccgtcattgagtccggttccaccgagttccttcctggttct
ttggttgacctctctgaggcgaagctggctaactctgaggcaatcggtgcgggcggtcag
cctgcagagctgcgttctgagatcatgggtatcaccaaggcctctctcgcaactgagttt
tggctgtctgcagcgtccttccaggagaccactcgtgtcctgactgatgctgctatcaac
aagcgctccgataagctcatcggcctgaaggagaacgtgatcatcggtaagctgatccca
gctggtactggtatttcccgttaccgcaacatctccatcaagccaaccgaggctgctcgc
aacgccgcatactcgatcccaacttatggtgagtcgatttacggtgacgatggattcggt
gagttcaccggcgcatccgtcccattggatgaggctttctag
DBGET
integrated database retrieval system
