Corynebacterium glutamicum K051: WA5_0540
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Entry
WA5_0540 CDS
T02508
Symbol
RpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cgu
Corynebacterium glutamicum K051
Pathway
cgu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WA5_0540 (RpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgu03021
]
WA5_0540 (RpoA)
03400 DNA repair and recombination proteins [BR:
cgu03400
]
WA5_0540 (RpoA)
Enzymes [BR:
cgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WA5_0540 (RpoA)
Transcription machinery [BR:
cgu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WA5_0540 (RpoA)
DNA repair and recombination proteins [BR:
cgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WA5_0540 (RpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
CCH23761
LinkDB
All DBs
Position
575338..576354
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AA seq
338 aa
AA seq
DB search
MLISQRPTITEEFVNNARSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVKIDGVL
HEFTTISGVKEDVSDIILNIKGLVLSSDSDEPVVMQLVKEGPGVVTAGDIQPPAGVEIHN
PDLHIATLNETAKIEIELIVERGRGYVPATVTATGGEIGRIPVDQIYSPVLKVSYKVEAT
RVEQRTDFDKLVIDVETKNSITARDALASAGKTLVELFGLARELNIAAEGIEIGPSPQET
EYIAAYSMPIEDLDFSVRSYNCLKREDIHTVGELAERAESDLLDIRNFGQKSINEVKIKL
AGLGLTLKDAPEDFDPSTLEGYDAETGGYIDVEAEDSE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttcacagcgcccaaccatcaccgaggaatttgttaataacgcacgttcccgg
tttgtcatcgagccactggagccaggttttggctacaccctcggtaactccctgcgccgt
accctgctgtcctccattcctggagcagcagtaaccagcgtcaagattgacggtgtactc
cacgagttcaccaccatcagcggtgttaaggaagatgtctctgacatcatcttgaacatc
aagggattggttttgtcttctgattccgatgagccagttgttatgcagctggtcaaggaa
ggcccaggagttgtaactgcaggtgacattcagccaccagcaggcgtggagatccacaac
ccggatctgcacattgcaaccctgaacgagaccgccaagattgagatcgagctcatcgtc
gagcgtggacgtggctacgttcccgcaactgttactgcaaccggtggagagatcggccgc
attccggtcgatcagatctactccccagtactgaaggtcagctacaaggttgaagctact
cgtgttgagcagcgcaccgactttgacaagctggtcatcgacgttgagaccaagaactct
attaccgcacgtgacgccctggcgtcggcaggtaagaccctggttgagctgttcggcctc
gcacgcgagctgaacatcgcagccgagggcatcgagatcggaccatctcctcaggagacc
gagtacatcgctgcctacagcatgccaatcgaggatctggacttctctgtccgttcctac
aactgcctcaagcgcgaagacatccacaccgtgggtgaactcgcagagcgcgctgagtcc
gatttgctggatatccgcaacttcggacagaagtcgatcaacgaggtaaagatcaagctt
gctggcctgggtctgaccctgaaggatgctcctgaagacttcgatccttcaactcttgaa
ggttatgacgccgaaactggtggctacatcgatgtcgaggcggaagattccgagtaa
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