Corynebacterium glutamicum K051: WA5_0742
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Entry
WA5_0742 CDS
T02508
Name
(GenBank) putative helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgu
Corynebacterium glutamicum K051
Pathway
cgu03420
Nucleotide excision repair
cgu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WA5_0742
03430 Mismatch repair
WA5_0742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgu03400
]
WA5_0742
Enzymes [BR:
cgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WA5_0742
DNA repair and recombination proteins [BR:
cgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WA5_0742
MMR (mismatch excision repair)
Other MMR factors
WA5_0742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CCH23962
LinkDB
All DBs
Position
814212..817424
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AA seq
1070 aa
AA seq
DB search
MRRISPRLLSQYLGQEHAPTDQQSAIIGSEPGPLLVVAGAGAGKTETMAARVVWLVANGF
VAPDQVLGLTFTRKAAQQLSQRIRKRLETLAGVPRLKDIDPTGQLEKNLQAITPTVSTYD
SYAGTLIREYGLLLPVEPSARLITQTELYHIARNVVNNYDGELTATQTPATVTEYLLKLV
SEMDNHMVTAEDIREESDPFIKLFDELPKGKGQRDNLNAEMTKWRDTQVARLQYLPLVKA
LKEELHNQAVVTFGEQMSKAAHLASTHPQVGYSQRRRFRVVMLDEYQDTSHSQRVLLSSL
FGGTDPGLTVNAVGDPMQAIYGWRGATAANLENFVDDFPVIHLDGKTRAPKNELTTSWRN
PPEVLTLANAVSREVLGSPDAPTRTVQPLQPREGAPTGEVSLGWFGTAAQEREFVADEMV
KHWNAREEKGTFTAAVLVRKKRHSAPMAEELTKRGIPVEIVGLSGLLDIPEIADLISLAT
MLVRPHDNRAALRILAGPHVGLGVADLQRLQGRARNIAGRVSRERREKNPDPLAELDAII
EEATAIEPEAVVGLADAVADLGEGDRFSEEGLSRLKRLATQLRYLRKYSLGRSVADIFAD
IETVFNIRTEVLSRQDPHADGAAGTVHLDKFAEEVASHGGIGLPELLDYFELAKDQEEGL
EPGEVTVRSDRVQILTVHKAKGLEWDIVSVLHADASTYDAKASTWLKNVTMIPSSLRGDA
GTGAPEMDTSEADDRKALEDSGKEYTSEVREGLREENSRLFYVGITRSERVLLVTGSALD
ESGTKAKVPYGHLEILRDKAPECVVSWWEGEEGDVEKQKPAEGVFPQLLAADSSGADLVR
GPRAEPNNEGGLESLWEKEVSALIDEHRRLSNPIVEVETPRELTATDLVSMKNNPEQFAR
RMRRPVPFKPNTYAKRGTLFHQWLEDRFGSTALLDETELPGIDEDYSDDAFIELRDAFLG
STWENRTPEFVEHPFEVTIGEHVIRGRMDAVFHTDGTWMVVDWKTGRTPTGPEMDAAIIQ
LAVYRLAWARLKGLEPEEVRAAFHYVAHDHTFEPNDLPTQEELARLLSQE
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaggatttctcctcgactgctctcccaatatttgggacaagagcatgcgccaact
gatcagcaatctgcgatcattggatccgaacccggcccactgttggtagtggctggtgcc
ggcgcaggaaaaacggagacgatggctgcacgagtggtgtggttggtagcgaacggattc
gtcgccccagatcaagtgctgggtctgacatttaccaggaaggcggcgcaacagctgtcg
cagcgcatccgaaagcgtttggagactcttgctggtgtgcctcgcctgaaagacattgat
cccaccggccagttggagaaaaaccttcaggcgatcaccccaacggtatccacctatgac
tcctatgcgggcacgttgattagagaatacggattgctgcttccagtagaaccttccgca
aggttgatcacacaaacggagctttatcacatcgctcgcaacgtggtgaacaactacgac
ggtgagctcaccgccacccaaacgccggccactgtcacggaatacctcctcaagctggta
tccgaaatggacaaccacatggttaccgcagaggatatccgtgaggagtccgatccgttc
attaagcttttcgacgaactccccaagggcaagggtcagcgcgacaacctcaacgccgaa
atgacgaagtggcgggatacacaggtcgctcgcctccagtacttgcccctcgtgaaggct
ttgaaagaggaactgcacaatcaggctgtggtgacgtttggtgagcagatgtctaaggca
gctcatctcgcatcgacgcatcctcaggtgggctattcgcagaggcgacggttccgcgtt
gtcatgcttgatgagtatcaggacaccagccactcgcagcgtgtgttgttgagcagtctt
ttcggtggcaccgatcctggtctcactgttaatgctgtgggcgatccaatgcaggcgatt
tatggttggcgaggtgcgacagcggcgaacttggagaatttcgttgacgatttccccgtc
atccatctcgatggaaaaacgagagcaccgaaaaacgagttgaccacaagttggcgaaac
ccaccagaagtcctcacccttgccaacgcagtttcgcgggaggtgcttgggtcgcccgat
gcgccgactcggacggtgcagccgctgcagcctcgggaaggcgcaccgaccggtgaagtg
tcgctcggatggtttggtacggcggcgcaggaacgtgagtttgtggctgatgagatggtg
aagcattggaatgcgcgggaggagaagggcacatttactgctgcggtgttggtgcgtaag
aagcgtcattcggcaccgatggcggaggagctgaccaagcgtggcatccccgtggagatc
gtcggactgtctggtttgttggatatccctgagattgccgatctaatttctctagcaact
atgctcgtgcgtcctcacgataatcgggctgcgttgcgtattttggcgggcccgcatgtg
ggtttgggtgtggcggatttgcagcggttgcagggtcgtgcgcgcaatattgcgggtcgt
gtgtctcgtgagcgtcgagagaagaacccagatccattagcggagcttgatgcgattatt
gaggaagcgactgcgattgaaccggaagctgtggttggtctagctgatgcggttgccgat
ttgggtgagggcgatcgtttcagcgaggaggggttgagtcgtttgaagcgactggccact
cagttgcgatatttgcgtaagtacagcttgggtcgttcggtggcggacatttttgctgat
attgaaactgtgttcaatattcgcacggaggtgttgtcgaggcaggatcctcacgccgat
ggtgctgctggaacggtgcatttggataagttcgcagaagaggtcgcaagtcacggtggc
attgggctgcctgagctgttggactattttgagctcgcgaaggatcaggaagagggcctt
gagccgggtgaggtgacggttcgcagcgatcgtgtgcagatccttactgtccacaaggct
aagggtttggagtgggatatcgtttcggtgttgcatgccgatgcgtcgacctatgatgcg
aaggcttcgacgtggttgaaaaatgtcacgatgatcccgtcgtcgcttcgtggcgatgcc
gggaccggcgccccagagatggatacctctgaggcggacgatcgcaaagctctggaagat
tccggcaaggagtacaccagtgaagtgcgtgaggggttacgggaggaaaattcgcgactg
ttttatgtcggtatcacgcgcagcgaacgggtgttgctcgtgacgggttcggcgcttgat
gaaagtggcacaaaggcgaaagttccctacggccacttggagatccttcgggataaagcg
ccggagtgcgtggtgtcgtggtgggaaggggaagagggggacgtcgaaaagcaaaaacct
gcggaaggcgtcttcccgcaactgctcgccgctgactcctccggcgcggatttggtgcgc
ggcccgcgcgccgagccaaacaacgagggcgggctggaaagcttgtgggaaaaagaggta
agcgcgcttatcgacgaacaccgccgcctttccaaccccatcgtcgaagtcgaaacgccc
cgcgaactcacggccaccgacctcgtctctatgaaaaacaatcccgaacagttcgcccga
cgaatgcgtcgccctgtcccgttcaaaccaaacacctacgcaaaacgcggcacactgttc
caccaatggctcgaagatcggtttggcagcaccgcgcttctcgacgaaaccgagctcccc
ggcatcgacgaggactactcggatgacgcattcatcgaactccgcgacgcgttcctagga
tctacttgggaaaaccgcacaccggaattcgtcgaacatcccttcgaagtaacgatcggc
gaacacgtcatccgcggccgcatggacgccgtcttccacaccgatggcacctggatggtg
gtcgactggaaaaccggacgcaccccaaccggccccgaaatggacgcagcgatcatccag
ctcgctgtctatagactcgcctgggcacgactcaaaggcctcgaacctgaagaagtccgc
gcagcattccattacgtcgcccacgatcacacctttgagccgaacgatctgccgactcaa
gaagaactagcccggctgctcagtcaggaatga
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