Corynebacterium glaucum: CGLAU_01730
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Entry
CGLAU_01730 CDS
T05058
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cgv
Corynebacterium glaucum
Pathway
cgv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGLAU_01730 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgv03021
]
CGLAU_01730 (rpoC)
03400 DNA repair and recombination proteins [BR:
cgv03400
]
CGLAU_01730 (rpoC)
Enzymes [BR:
cgv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGLAU_01730 (rpoC)
Transcription machinery [BR:
cgv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGLAU_01730 (rpoC)
DNA repair and recombination proteins [BR:
cgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGLAU_01730 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AQQ14333
UniProt:
A0A1Q2HU20
LinkDB
All DBs
Position
340634..344638
Genome browser
AA seq
1334 aa
AA seq
DB search
MFDVNLFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDDEARHNDLSTLEAEMIVEKKEVEADANAEIADRAQKLEED
LAELESAGATAAARKKVQNAADKEMQHIREAGEREVERLDEIWTTFTKLAPKQMIIDENL
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELRGIIAEGKGQKKVRALKRLKVVA
AFQRSGNDPAGMILDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVDHDYAQNIKSAKRKVERQH
PEVWDVLEEAIAEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYFLTMLKSEGEIGGE
GGYAPADENGPARGVYSSYREAIMAYDRGVLGLQAPIKVRIDHLRPTPEIEAEQFADGWE
KGQPWMMETTLGRIMFNELLPFNFPYQEGAMVRKGGGSGKVLLGDIIQSMVEKYPMITVA
QVLDKMKDAGFYWATRSGITISMSDVLVLPNKEEVLEEYEREAEEIERKFWEKGALTEEN
RYDRLVELWQDATNKVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSRG
EYITRPIKTSFREGLTVMEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTHQGVKVPVATAAGADGRFVRHDLVETSVSGRVLAADAKDAEGNVVLAADTELSEER
IDALVAAGVTEVKVRSVLTCQTPTGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIGEPGT
QLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTISLEDEGNFWTLTIHP
DDDSDDVVYEKLSKRQGLAQVRRPMESNPDAMIERSLREGDRVEVGERLMRGAADPHDVL
EVLGRRGVEKHLINEVQAVYRTQGVSIHDKHIEIIIRQMLRRGTVIDSGSTEFLPGTLVD
LAEARQVNAAAVADGGEPAEMRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRS
DKLIGLKENVIIGKLIPAGTGISRYRNIQVKPTEAARSAAYSIPSFGDSIYGDEGYGEFT
GASVRLDEYGFEQM
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaacctcttcgacgagcttcgcattggcctggccaccgccgacgacatt
cgtcgttggtcccacggcgaagtgaaaaagccggagaccattaactaccgcaccctgaag
cccgagaaggacggcctgttctgcgagcgcatcttcggcccgacccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtgcgctacaagggcatcatctgcgagcgctgtggcgtt
gaggtgaccaagtccaaggtgcgtcgtgagcgcatgggccacatcgagcttgccgctccg
gtgacccacatctggtacttcaagggtgtgccgagccgcctgggctacctgcttgacctg
gcgccgaaggatctcgagcgcatcatctacttcgccgcgaacatcatcacctccgtggat
gacgaagcgcgccacaacgatctgtcgaccctcgaggccgaaatgatcgtggagaagaag
gaagtcgaggcggacgccaacgccgagatcgccgaccgtgcgcagaagctcgaggaagac
ctcgctgagctggagtccgccggcgcgaccgctgctgcccgcaagaaggtgcagaacgct
gccgacaaggagatgcagcacatccgcgaggctggcgagcgcgaggtggagcgcctcgac
gagatctggaccacctttaccaagctcgccccgaagcagatgatcatcgacgagaacctc
tacgaggaactggtcgaccgctacgaggactacttcaccggcggcatgggcgctgaggcg
atccagaccctgatccgcaacttcgacctcgatgctgaggctgaggagctgcgcggcatc
atcgccgagggcaagggccagaagaaggtccgcgctctgaagcgcctgaaggttgtcgct
gcgttccagcgctccggcaacgacccggccggcatgatcctggacgcgatcccggtgatc
ccgccggagctgcgcccgatggtgcagctcgacggtggccgcttcgccacctcggacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctgcaggaatccgtcgacgcg
ctgtttgacaacggccgccgcggccgccctgtcaccggcccgggcaaccgtccgctgaag
tccctgtccgacctgctcaagggtaagcagggccgcttccgccagaacctgctgggtaag
cgcgtggactactccggtcgttccgtgattatcgttggtccgcagctcaagctgcacgag
tgcggtctgccgaagctgatggctctcgagctgttcaagccgttcgtgatgaagcgcctg
gtggatcacgactacgcgcagaacatcaagagcgcgaagcgcaaggtggagcgtcagcac
cctgaggtgtgggacgtgcttgaagaggcgattgcagagcacccggtgctgcttaaccgt
gcaccgacgctgcaccgcctgggcattcaggccttcgagccgaagctggtcgagggtaag
gctatccagctgcacccgctggcttgtgaggcgttcaacgccgacttcgacggtgaccag
atggcagtccacttgccgctgtccgccgaggcgcaggctgaggcccgcatcctcatgctg
tcttccaacaacatcctgtccccggcgtccggcaagccgctggcaatgccgcgcctggat
atggtgactggcctgtacttcctgaccatgctgaagtctgagggcgagatcggtggtgaa
ggcggctacgctccggctgacgagaacggcccggcacgtggcgtgtactcgtcgtaccgt
gaggccatcatggcttacgaccgcggtgtgcttggcctgcaggcaccgatcaaggtgcgc
atcgaccacctgcgtccgacgccggagatcgaggctgagcagttcgccgacggttgggag
aagggtcagccgtggatgatggagaccaccctgggtcgcatcatgttcaacgagctgctg
ccgttcaacttcccgtaccaggaaggcgcgatggtgcgtaagggcggcggctccggcaag
gtgctgctcggcgacatcatccagtccatggtggagaagtacccgatgatcaccgtggct
caggtgctggacaagatgaaggacgccggtttctactgggcgacccgttccggcatcacc
atctccatgtccgacgtgctcgtgcttccgaacaaggaagaggtgctcgaggagtacgag
cgcgaggctgaagagatcgagcgcaagttctgggaaaagggtgcgctgaccgaggagaac
cgctacgaccgtctggtcgagctgtggcaggacgccaccaacaaggtgggtcaggccgtg
gaggatctctacccggacgacaacccgattccaatgatcgtgaagtccggtgcggccggt
aacatgcgccagatctggaccctggcgggcatgaagggcatggtcgtgaactcgcgtggt
gagtacatcacccgcccgatcaagacctccttccgcgagggcttgaccgtgatggagtac
ttcaacaactcccacggttcccgtaagggcctggccgataccgcgctgcgtaccgcagac
tctggatacctcacccgtcgtctggtggacgtggcgcaggacgtcatcgtccgcgaagag
gactgtggcacccaccagggtgtcaaggttccggtggcaacggctgcaggtgccgacggc
cgcttcgtgcgccacgacctcgtcgagacttccgtctccggccgcgtgctcgcagctgac
gcgaaggacgccgagggcaacgtggtgctggcggctgacacggagctctccgaggagcgt
atcgacgccctcgttgcagccggtgtcactgaggtcaaggtccgctcggtgttgacctgc
cagaccccgaccggtgtttgcgcgaagtgctacggcaagtccatggcttccggccagctg
gtggacatcggcgaggccgtgggcatcgtcgccgcccagtcgattggtgagccgggtacg
cagctgaccatgcgtaccttccaccagggtggtgtcggcggcgacattaccggtggtctg
ccgcgtgttcaggagctgttcgaggcccgcgtgccgaagaaccgcgccccgatcgcgtcg
gtggctggcaccatctcgctcgaggacgaaggcaacttctggacgctgaccatccacccg
gacgacgactcggacgacgtggtctacgagaaactgtcgaagcgccagggcctggcacag
gtgcgacgcccgatggagtccaacccggatgccatgatcgagcgctcgcttcgtgaaggc
gaccgtgttgaggtgggtgagcgcctcatgcgcggtgccgctgacccgcacgacgtgctc
gaggttctcggccgccgaggtgtggagaagcacctgatcaacgaggtgcaggctgtgtac
cgcacccagggtgtgtccatccacgacaagcacatcgagatcatcatccgccagatgctg
cgtcgcggtaccgtcatcgactccggttctaccgagttcctgccgggtaccctggtcgac
ctcgccgaggcacgccaggtcaatgccgcagcggtggccgacggcggcgagcctgccgag
atgcgctccgagatcatgggtatcaccaaggcctcgcttgccaccgagtcctggctgtcc
gcggcctccttccaggagaccacccgcgtgcttaccgatgccgcgatcaacaagcgctcc
gacaagctcatcggcctgaaggagaacgtgatcatcggtaagctgatcccggctggtacg
ggcatctcccgctaccgcaacatccaggtcaagccgaccgaggcggctcgctccgcggca
tactcgatcccgagcttcggcgattcgatctacggcgacgagggttacggcgagttcacc
ggcgcctccgtccgcctcgacgagtacggctttgagcagatgtag
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