Candidatus Campbellbacteria bacterium GW2011_OD1_34_28: UR58_C0001G0187
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Entry
UR58_C0001G0187 CDS
T04488
Name
(GenBank) transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
cgw
Candidatus Campbellbacteria bacterium GW2011_OD1_34_28
Brite
KEGG Orthology (KO) [BR:
cgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgw03000
]
UR58_C0001G0187
Transcription factors [BR:
cgw03000
]
Prokaryotic type
Helix-turn-helix
Other families
UR58_C0001G0187
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
HTH_29
Rrf2
HTH_IclR
Suv3_N
HTH_24
MarR
HTH_36
HTH_5
HTH_23
HTH_47
HTH_28
DUF5319
MarR_2
HTH_Crp_2
Ste5_C
Motif
Other DBs
NCBI-ProteinID:
AKM83904
LinkDB
All DBs
Position
195520..196299
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AA seq
259 aa
AA seq
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MSTYLKDVKITVNNFYNNMIKEIVENFDLSEKEALVYLANLKKGKSKVSDIAKESGLNRI
TTYEILKRLSQKGLANGITYNKLTYFKVIDPESFLIKKERQISLAKKFIPQLKILKDSKT
KKPKIDFFTGIEGIKSIYEDTLKSKNKVIYNVTNVTNLTDILDHDFLNDYFKKRTKRKIK
VRVLISEEGANKELLEDSKKLLREYKIFDSKKHKIPNELMIYDDKVAILSFSGQIGILIE
DEEIAKSMYSIWEIMWENL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaacatatttaaaagatgttaaaataactgtaaataatttttacaacaacatgata
aaagaaattgtagaaaattttgatttaagcgagaaagaagccttggtttatttggcgaat
cttaaaaaaggtaaaagcaaagtaagtgatattgcgaaggaatctggcttaaacaggatt
acaacttatgaaatattaaaaagactttcacaaaaagggctagcaaacggaataacttat
aataaacttacctatttcaaagtaatagaccctgaatcttttctgataaaaaaagagcga
cagatatctttggcaaaaaaatttatacctcaattaaaaatacttaaagattccaaaact
aaaaaaccaaaaatagactttttcacaggaatagaagggataaaatcgatttatgaggac
actcttaaatcaaaaaataaagttatttataatgttacaaatgtaactaatctaacagat
attttggatcatgattttttaaatgattatttcaaaaaaaggacaaaaagaaagattaag
gttcgagtgctcatttcggaagaaggtgcgaacaaagaattgttagaggatagtaaaaaa
ttactaagagaatataaaatatttgacagtaaaaaacataaaattccaaatgaattgatg
atatatgatgacaaagttgctattctttcgttttctggacaaataggtattttaatagaa
gatgaagaaatagcaaaatctatgtattcaatatgggaaataatgtgggaaaatttataa
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