Candidatus Campbellbacteria bacterium GW2011_OD1_34_28: UR58_C0001G0205
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Entry
UR58_C0001G0205 CDS
T04488
Name
(GenBank) polyribonucleotide nucleotidyltransferase, polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cgw
Candidatus Campbellbacteria bacterium GW2011_OD1_34_28
Pathway
cgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UR58_C0001G0205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgw03019
]
UR58_C0001G0205
03016 Transfer RNA biogenesis [BR:
cgw03016
]
UR58_C0001G0205
Enzymes [BR:
cgw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UR58_C0001G0205
Messenger RNA biogenesis [BR:
cgw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UR58_C0001G0205
Transfer RNA biogenesis [BR:
cgw03016
]
Prokaryotic type
tRNA degradation factors
UR58_C0001G0205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
S1_RRP5
KH_Vigilin
KH_PNO1_2nd
KH_KhpA-B
aRib
KH_N4BP1_2nd
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
AKM83922
LinkDB
All DBs
Position
211667..213847
Genome browser
AA seq
726 aa
AA seq
DB search
MKSKEYTLEIGGQIMTAQFTDLADQTNGSVILRYGDTTILATAVMSKNRKEGANWFPLTV
DYEEKFYAAGQILGGRFMKREGKPSDEAVLGGRVVDRTIRPLFDQYIRNEIQVIITVLSL
GDYDPDVLAVNAASLALAVSDIPWNGPVSAVRIGKNGDYKTNPTYEFIKDGALEMDLVAC
GKDGNINMIEVGSKEISNETINEGLRRASEEIEKIQEWQKKIISEIGKEKKVMEKAQLLP
ETIELFEKEITPKLESAIFSGPGKKNIEELKEEWQKIFTEQIPDENLSLALDHYEETIDE
ILHKEAIENNRRADGRGMEEVRPLYAQAGGISPIIHGSGIFYRGGTHVFSALTLGGPKDA
QLIEGMEEQREKKFMHHYNFPPFSSGETGRMGGVNRRAVGHGALAEKALLAILPDKEAFP
YTIRIVSESMASNGSTSMASVCGSTLALMDAGVPIKAPVAGIASGLMMHDENNYKLLTDI
QGPEDHHGDMDFKVAGTRSGVTAIQMDVKVAGIPLKILGEALVAAEKARLQILDVIEKEI
SAPRPKISPNAPEILIIKIKQDQIGGVIGSGGKTIKDIKEKTGAEIDIEDDGTVYITGKN
GSAQEAKRIVEAMTHEYVAGEKFEKAEVVKIMEFGAFVRIAPGTDGLVHVSEIAPFRVDD
VSKVLKEGQIVPVVIKEIDGQGRMKLSIKAIDPKFIPNPAGAVPATPVPPVSSTPDDSKT
EEPKQV
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtaaagaatacacattagaaatcggaggacaaataatgactgcccaattcacc
gacttggccgaccaaacaaatggttcggttatcttgcgttatggagacactacaatattg
gcaaccgccgtaatgtctaaaaatagaaaagaaggtgcaaactggtttcccctgacagtt
gattacgaggagaaattttacgcagcagggcaaattcttggaggtcgctttatgaagaga
gaaggaaagccatctgacgaagctgttttgggcggtcgtgtagtagacagaacaattcgc
cctctttttgaccaatacatcagaaacgaaatacaggtaatcatcacagttctatctttg
ggagattatgatccagatgtcttggcggtaaatgcagcctctcttgctttggcagtatct
gacattccttggaacggtccagtaagtgctgttagaattggaaaaaatggagactacaaa
acaaatccgacttatgaatttatcaaagacggtgctttggaaatggacctggttgcttgt
ggaaaagacggcaatataaatatgattgaggttggatcaaaagaaatctcaaacgaaaca
atcaacgaaggacttagaagagcgtccgaagaaattgaaaaaatacaagaatggcaaaag
aaaataatttcagaaatcggaaaagaaaaaaaggttatggaaaaagcacaactgcttcca
gaaacaattgaactatttgaaaaagaaattactccaaaattggaaagtgctatttttagt
ggccccggaaaaaagaatatcgaagaattgaaagaagaatggcaaaaaatatttaccgaa
caaattcccgatgaaaatctttctctggcattggatcactacgaagaaacaattgacgaa
atccttcacaaagaagcaattgaaaacaacagaagagcagacggcagggggatggaagaa
gtccgtcctttgtatgcccaagcaggtggtatttctccaatcattcatggatcaggaata
ttctaccgaggaggaactcacgttttttcagccctaacattgggtggtccaaaagatgca
caattaattgaagggatggaagaacaaagagaaaagaaatttatgcaccactacaacttt
cctcccttttcatctggagaaacaggaagaatgggcggagtaaatagaagagcagtagga
cacggagcattggcagaaaaagcattacttgctattttgccagataaagaagctttccct
tatacaatcagaattgtttccgaatcaatggcatcaaacggatcaacatctatggcatct
gtttgtggaagtacccttgccctaatggacgcaggtgttcctatcaaagcgcctgttgct
ggtattgcttctggattgatgatgcacgacgaaaacaattacaaactgcttacagatatt
caaggcccagaagaccatcacggtgatatggactttaaagttgccggaacaagaagtgga
gttaccgcaattcagatggatgtaaaagtagctggtattcctttgaaaattttgggtgaa
gcattggtagcggcagaaaaggccagattacaaattcttgatgttatagaaaaagaaatt
tctgcacctcgtccaaaaatttctccaaacgcccctgaaattttgatcatcaaaattaaa
caagatcagatcggtggagtgattggatcaggaggaaaaacaattaaagatatcaaagaa
aaaacaggtgccgagatagatattgaagatgatggaactgtttatatcacaggaaaaaac
ggttcggcccaagaagctaaaagaattgttgaagctatgacacacgaatatgtggctggt
gaaaaatttgaaaaagccgaagtagtaaagatcatggaattcggcgcatttgtccgaata
gctcctggaacagatgggttggttcatgtttcagaaattgctcctttcagagttgatgat
gtttcaaaagtattgaaagaaggtcaaatcgttcctgtcgtaatcaaagaaattgacgga
caaggcagaatgaaactttctatcaaagcgatagatccaaaatttattccaaatccagca
ggggctgtaccagcaacaccggtacctcctgtatcatctacaccggacgattccaaaaca
gaagaaccaaaacaggtgtaa
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