Candidatus Campbellbacteria bacterium GW2011_OD1_34_28: UR58_C0001G0435
Help
Entry
UR58_C0001G0435 CDS
T04488
Name
(GenBank) DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cgw
Candidatus Campbellbacteria bacterium GW2011_OD1_34_28
Pathway
cgw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UR58_C0001G0435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgw03021
]
UR58_C0001G0435
03400 DNA repair and recombination proteins [BR:
cgw03400
]
UR58_C0001G0435
Enzymes [BR:
cgw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UR58_C0001G0435
Transcription machinery [BR:
cgw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UR58_C0001G0435
DNA repair and recombination proteins [BR:
cgw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UR58_C0001G0435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
SAM_EPH
RAD51D_N
HHH_XRCC3_RpoA
Ribosomal_TL5_C
Motif
Other DBs
NCBI-ProteinID:
AKM84152
LinkDB
All DBs
Position
460849..461814
Genome browser
AA seq
321 aa
AA seq
DB search
MSDYNILVPSKPRVVEDGQFKGVYEIDGLYPGYGYTLGNSLRRIILSSLPGAAITSVKIA
GVDHEFSTISGVKEDVINIILNLKKVRIKLLTDEPQEIRLKVKGVKDVTAKDIEIPGQAE
ILNPDQHIASVTDKNTTLEISMIVVKGLGYIPKEELQKDKVEIGSIALDAYFTPIRRVSY
EVENMRVGDRTDFNRLRIFIETDGMITAKEALENSIDIMIRQLKAIVGFKEEEVVEEKQE
DSSEDKEDSKDSEDTEFLKTRVETLDLSARTMNALDSANIRTVGGLARKKEEDLLAIDGL
GGKGLQEIKRALSNFGITLKS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactacaatattttagtgccttcaaagccaagggtagttgaagatggccaattt
aaaggcgtatacgaaatagacggtctttatcctggatatggatatacgctaggtaattct
ttgagaagaattattttgtcgtctctgcctggtgctgcaataacatcggttaaaattgct
ggtgttgatcacgagttttctactattagtggtgtaaaagaagatgttattaacatcatt
ttaaatttaaagaaagtaagaatcaaattgcttacagacgaacctcaagaaattagattg
aaggttaagggtgttaaagatgtaacagcaaaagatatagaaattccaggacaagcagaa
attcttaatcctgatcagcatattgcttctgtcacagacaaaaatacaacacttgaaatc
agtatgatcgttgtaaaaggtttgggatatattccaaaagaagaattgcaaaaagataaa
gttgaaattggttcaatcgctttggacgcatactttactcctatcagaagagtaagttat
gaagttgaaaatatgcgtgttggagacagaacagactttaacagattgagaatctttatt
gaaacagacggaatgataacagcaaaagaagctttggaaaattctattgatataatgata
agacaactaaaagcaatcgttggattcaaagaagaagaggttgttgaagaaaaacaagaa
gatagctcagaagataaagaagattcaaaagactcagaagatacagaatttttgaagaca
agagttgaaactttggatctatcagcaagaacaatgaatgcacttgattcagcaaacatc
agaacagtcggagggttggcaagaaagaaagaagaagatttgttagcaattgacggattg
ggaggaaaaggtttgcaagaaatcaaaagagcattaagcaattttggaatcacactaaag
agttaa
DBGET
integrated database retrieval system
