Candidatus Campbellbacteria bacterium GW2011_OD1_34_28: UR58_C0001G0453
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Entry
UR58_C0001G0453 CDS
T04488
Name
(GenBank) topoisomerase I, DNA topoisomerase I protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cgw
Candidatus Campbellbacteria bacterium GW2011_OD1_34_28
Brite
KEGG Orthology (KO) [BR:
cgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgw03032
]
UR58_C0001G0453
03400 DNA repair and recombination proteins [BR:
cgw03400
]
UR58_C0001G0453
Enzymes [BR:
cgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
UR58_C0001G0453
DNA replication proteins [BR:
cgw03032
]
Prokaryotic type
DNA Topoisomerases
UR58_C0001G0453
DNA repair and recombination proteins [BR:
cgw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UR58_C0001G0453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Alliinase_C
Auto_anti-p27
Rubredoxin
Zn_Ribbon_TF
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
AKM84170
LinkDB
All DBs
Position
complement(476772..478991)
Genome browser
AA seq
739 aa
AA seq
DB search
MSKLLIVESPAKAKTINKYLGKDYVVTSSVGHIRDLPKSNKTAIDIEGGFIPNYETIKGK
EKVIKELKTLAKDADEIILAPDPDREGEAIAWHLLQILKEDLKSNKLQVSSIKRVTFNEI
TESAIKEALKHPRDIDDNLRRAQEARRVLDRLFGYDLSGLIWKKVRYGLSAGRVQSPALR
ILVEKEREIKAFIPEDYFVITADVKTKSATTFTLNCSEEPRDKNQVEKILEVGNNGTWKV
ADLKETEAKRSPRAPFTTSTLQQTASSRMGFAPSKTMGVAQKLYEAGYITYMRTDSTTIS
QTAQKQILSEIEKKYGKKYVEARVYKTKSKNAQEAHEAIRPTSITKENVGSTDEQKKLYR
LIWQRTIASQMSDAKILRSKIVVDVEGKENLPAGEARIPEFNINGSRVLFDGWLLADPSA
RGEDTELPAIKIGEDLDLLKMNVEDKQTQPPQRYSEAGLIKELEKRGIGRPSTYATIIKT
LKDRAYADKEGTALRPTDTGEVVSTFLENHFENYISDLFTAEMEDKLDEIANGERDYVKT
LTEFYTPFTKDIKAKEGIEKITNLGDAPKEFKCPECGGAMVIKLAKNGKFMSCAKFPDCN
GARTIEGKELEGPKETGEPCPDCGNPLVERDGKFGRFIACSNYPKCKFVKKDEELERKNS
TGVKCTECKNGYMVKRRGRFGEFYSCSNYPDCKLAIKAEPTGNLCPMCGKLMMKGTKTIP
DRCSDKNCPNHRPDKLSSK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacttttgatagtagagtctcctgcgaaagcaaagactattaataaatatctt
ggcaaagattacgttgtcacatcatctgtgggacatattcgtgatttgcctaaaagcaat
aaaacagccatagatatagaaggagggttcattcccaactatgaaacaatcaagggaaaa
gaaaaggtgataaaagaattaaagactcttgcaaaggatgcagacgagattattctcgcc
cccgatcctgaccgtgaaggagaagctattgcgtggcacctgcttcaaatcctaaaagag
gatttgaagagtaataagttacaagtatcaagtatcaagagagtgacctttaacgaaatt
accgaaagtgcaatcaaagaagcgctgaaacacccgcgtgatatagatgataatttaaga
cgagctcaagaagctcgtcgtgttttagatagactttttggatacgatcttagcggtttg
atttggaaaaaagttcgttatggtctttctgcaggaagggttcagtcccctgctttgcgt
attttggttgaaaaagaaagagaaataaaagctttcattccagaagactacttcgtaatc
accgcagatgtaaaaacaaaatctgcaactacttttaccttgaattgttcagaagaaccc
cgcgacaaaaatcaagtagaaaaaattcttgaagtcggaaataacggcacttggaaagta
gccgatctaaaagaaaccgaggcaaagagatctcctcgtgctccttttactacatctaca
ctacaacaaacagccagctctagaatgggatttgctccaagcaagacaatgggtgtcgcc
caaaaattgtacgaagcaggatacattacttatatgagaactgacagcacgacaattagc
caaactgctcaaaaacaaattttaagcgagatagaaaaaaaatacggcaagaaatatgtt
gaggcgagagtatacaaaacaaagtcaaaaaatgcacaagaagctcacgaagcaattcgt
ccaacaagcataacaaaagaaaatgttggatcaaccgatgaacagaaaaaattgtataga
ttgatttggcaaagaacaattgcctctcaaatgtccgatgcaaaaatattaagatcaaaa
atcgtcgttgatgttgagggaaaagaaaacctgcctgccggcgaggcaagaataccagaa
tttaatataaacggatctcgagttctttttgatggatggcttttggccgatccttctgct
cgaggagaagacacagaattgcctgcaataaaaattggcgaggatttagatttattaaaa
atgaatgtagaagacaagcagactcaaccacctcaaagatactccgaagctggtctgatt
aaagaattggagaaaagaggaattggtcgtcccagcacctatgcgacaattataaaaaca
ttaaaagaccgcgcttatgccgacaaagaaggaactgctttgcgaccaacagacacaggc
gaagtagtgagtacttttttggaaaatcattttgaaaactacatcagcgatttgtttact
gccgagatggaagataaattggacgaaatagcaaatggagaaagagattatgtaaaaact
ctaacagaattttacacaccttttacaaaagatattaaagcaaaagaaggaatagaaaaa
ataaccaatctgggtgatgcaccaaaagaatttaaatgtccagagtgtgggggcgcaatg
gttattaaacttgcaaaaaatggcaaatttatgagctgtgcaaaatttccagattgtaat
ggtgctcgaacaatagaaggaaaagaattggaaggtccgaaagaaactggcgagccatgt
cctgattgtggaaatcctttggtagagagagacggaaaatttggaagatttattgcttgt
tcaaattatccaaaatgtaagtttgtaaaaaaagatgaagaattggaaagaaaaaattct
actggtgttaagtgtaccgaatgtaagaacggatatatggtaaaaagaagagggagattt
ggagaattttattcttgttcaaattatcccgattgtaagttggctatcaaagcagagcca
acaggaaatctttgcccaatgtgtggcaagctgatgatgaaaggtaccaaaacaatccct
gacagatgtagtgataaaaattgcccgaaccataggccggataagttgagtagcaagtag
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