Corynebacterium glutamicum B253: SB89_06990
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Entry
SB89_06990 CDS
T03668
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cgx
Corynebacterium glutamicum B253
Pathway
cgx03030
DNA replication
cgx03410
Base excision repair
cgx03420
Nucleotide excision repair
cgx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SB89_06990
03410 Base excision repair
SB89_06990
03420 Nucleotide excision repair
SB89_06990
03440 Homologous recombination
SB89_06990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgx03032
]
SB89_06990
03400 DNA repair and recombination proteins [BR:
cgx03400
]
SB89_06990
Enzymes [BR:
cgx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SB89_06990
DNA replication proteins [BR:
cgx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SB89_06990
DNA repair and recombination proteins [BR:
cgx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SB89_06990
NER (nucleotide excision repair)
GGR (global genome repair) factors
SB89_06990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AJE67307
LinkDB
All DBs
Position
1483085..1485727
Genome browser
AA seq
880 aa
AA seq
DB search
MLIDGHSMAFRAFFALPAENFSTSGGQATNAVYGFLSMLSTLLKDEQPTHVAVAFDVGRK
TFRTDMFPAYKAQREATPPEFKGQVEILKEVLSTLGITTIEKIDFEADDVIATLSVAAKP
LGFKTLIVTGDRDSFQLVNDTTTVLYPMKGVSVLHRFTPEAVEEKYGLTPRQYPEFAALR
GDPSDNLPNIPGVGEKTATKWIAQYETLDNLLDHADEIKGKVGASLRERIEQVRMNRKLT
EMVKDLELPLGPDDFDMKPVQVAEVAAKFDDLEFGTSLRERVLAVVKAEGSAAPVEEVEA
EQVVVDTQSLAQWLPARAGQALALALTGVAKPAGGDAYALAIADTKRHAVLVDLADISAE
DEKALATWLASEDPKMLHGAKAAYHMLAGRGFELNGVVHDTAIAAYLLRPGQRTYELADV
YQRHLQRQLSTNDNGGQLTLLDAADDQSLVDDVIAILELSEELTKQLQEIQAFELYHDLE
IPLSGILARMEAIGIAVDVATLEEQLKTFIGQVAQEEEAARELAEDPTLNLSSPKQLQVV
LFETFGMPKTKKTKTGYSTAAAEIEALAIKNPHPFLDHLLAHRQYQKMKTTLEGLIREVA
PDGRIHTTFNQTVASTGRLSSTDPNLQNIPVRTEAGRKIRSGFVVGEGYETLLTADYSQI
EMRVMAHLSQDPGLIEAYREGEDLHNYVGSKVFNVPIDGVTPELRRQVKAMSYGLVYGLS
AFGLSQQLSIPAGEAKQIMESYFERFGGVQRYLREIVEEARKAGYTETLFGRRRYLPELT
SDNRVARENAERAALNAPIQGTAADIIKVAMIRVDRSLKEAAVKSRVLLQVHDELVVEVA
AGELEQVREILEREMDNAIKLSVPLEVSAGDGVNWDAAAH
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgacggccactcgatggctttccgcgcattctttgctttgccggctgagaat
ttctccacgtcgggcgggcaggccaccaatgctgtctatggctttctctcgatgctgtcc
acgttgttgaaggatgagcagcctactcatgtggcggtggctttcgatgtggggcgtaag
acgttccgtaccgatatgttcccggcgtataaggcgcagcgtgaagcaacgccgcctgag
tttaagggccaggtggaaatcctcaaggaggtgttgtccactttgggaattacgactatt
gagaaaatcgattttgaggctgatgatgtgatcgccacgttgtctgtggcggcgaaacct
ttaggctttaagacgctgattgttacgggtgaccgtgattccttccagttggtcaatgac
accaccacggtgttgtatccgatgaagggcgtgtctgtgctacaccgtttcacgccggaa
gcggtggaggagaagtatggactgacaccgaggcagtatccggagtttgcagcgctgcgt
ggtgatccttccgataacttgcctaatattcctggcgtgggcgagaagactgctaccaag
tggattgcccagtatgaaactttggataatttgctcgatcacgctgatgagatcaagggc
aaggttggtgctagcctgcgtgagcgcattgagcaggtccggatgaaccgcaagctcacg
gagatggtgaaggatctggagctgccgcttggtccggacgattttgatatgaagcctgtg
caggttgcggaggttgcggcgaagtttgacgatctggagttcggcaccagtttgcgtgag
cgggtgctggcggtggtgaaggccgagggttccgctgcccccgtggaggaagtggaagcg
gaacaggttgtcgtcgatacgcaatctttggcgcaatggctgcctgctagggctggccag
gcgcttgctttagcgctgactggagtggctaaacctgctggtggcgacgcgtatgcgctg
gcgattgcggataccaagcgccatgcagtgttggttgatttggcggatatttcggcggag
gacgagaaggcgctggcgacatggttggcgtcggaggatccaaagatgctgcacggcgcc
aaggctgcctatcacatgctcgctgggcgcggttttgagctgaacggcgtggtgcatgac
acggcgattgcggcttacttgctgcgtccggggcaacggacctatgagcttgccgacgtc
taccagcggcatcttcaacgccagttgtccacaaacgacaatggcggccagctcacgctg
ctcgacgcagctgatgaccaatcgcttgttgatgatgtcattgcaatccttgagctgtct
gaagaactgaccaaacagcttcaggagattcaagcttttgagctttaccatgacctggaa
attccgctatcgggaattctggcgcgcatggaggccatcggtatcgctgttgatgttgcc
actttggaagagcagttgaagactttcattggtcaggttgctcaggaagaggaagcagct
cgtgagctcgctgaggatccaaccctgaatctctcgagcccgaagcagctgcaagtggtg
ctttttgagacgttcggaatgccgaaaaccaagaaaaccaagaccggctactctacggct
gccgcggaaattgaagccctagcgatcaagaatccgcacccattcctagatcacctgttg
gcacaccgtcagtaccaaaagatgaagaccactctggagggcctcatccgtgaggtggcc
cctgatggccgtattcacaccaccttcaaccaaacggtggcgtctactggacgtttgtcg
tccactgatcccaacctgcagaacattcctgtgcgcaccgaggctggccgaaagattcgt
tcgggattcgtcgtgggcgaggggtatgaaaccctgctgactgccgactactcgcagatt
gaaatgcgcgtgatggcccacctttcccaggacccaggcttgattgaggcgtaccgcgaa
ggcgaagacctgcacaattacgtgggctccaaggtgttcaatgtgcccatcgatggcgtg
acccctgagctgcgtcgccaggttaaggccatgtcttacggcctggtctacggcttgtcg
gcatttggtttgtcccagcagttgagcattcctgccggcgaagcgaagcagattatggag
tcctacttcgagcgctttggcggagtgcagcgctacctccgggagatcgtggaggaggct
cgaaaagctggctacacggaaacgctgtttgggcgtcgtcgctacctgccggaactgacc
tcggataaccgtgtcgctcgtgaaaacgctgagcgtgccgcactgaacgctccgattcag
ggaactgccgccgacatcatcaaggtagccatgatcagggtggaccgttcactcaaggaa
gctgccgtgaaatctcgcgtgctgcttcaggttcacgatgaattggtcgtggaagtagcg
gccggcgagttggaacaagtccgtgagattctggaacgcgaaatggacaacgccatcaag
ctgtccgttcctttggaagtttcagctggtgatggcgttaactgggatgctgcagcgcac
taa
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