KEGG   Corynebacterium glutamicum B253: SB89_10780
Entry
SB89_10780        CDS       T03668                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
cgx  Corynebacterium glutamicum B253
Brite
KEGG Orthology (KO) [BR:cgx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cgx03016]
    SB89_10780
Enzymes [BR:cgx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     SB89_10780
Transfer RNA biogenesis [BR:cgx03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    SB89_10780
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: AJE67990
UniProt: A0AB36I5P9
LinkDB
Position
complement(2326122..2326673)
AA seq 183 aa
MRLFASITPPIEVTEHLINALRPYKDDLRWSDPDNWHITLAFYGELPDGAVEDLIEHLTS
AARINEEFTIRIKGAGSFNRKNLWMGVGGDTKDLRRLMADCLIDPEERRRQRAHLTVAKP
TQRQRSRDWDPVIPDLVHALSIYEGPEWPVDEIELVSSEPGKGRSGGPLYTTVATIALSS
ALV
NT seq 552 nt   +upstreamnt  +downstreamnt
atgagactgttcgcgtctatcactccgccgattgaagtcaccgagcatctgatcaacgcg
cttcgtccctacaaggatgatctgcggtggtctgatccagacaattggcacatcacgttg
gcgttctatggagaattacctgatggggcagtcgaagatctcattgaacatctgacaagt
gcagcccgaatcaatgaagaattcaccatcagaatcaaaggcgcaggctcatttaatcgg
aagaatttgtggatgggtgttggtggtgacaccaaagatctgcggcgactgatggctgat
tgcctcattgatcctgaggaacgccgacgccagcgtgcacacctgaccgtggcgaaacca
acgcagcgacagcgcagccgcgattgggatcctgtcatccccgatctggtccacgctctc
tctatctacgaaggccccgaatggccagtcgatgagattgaactggtgtcttctgaacct
ggaaaaggcagaagcggtgggccactgtatacaaccgtggccaccattgcgttgtcatct
gcgctggtttaa

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