Corynebacterium glutamicum B253: SB89_10780
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Entry
SB89_10780 CDS
T03668
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cgx
Corynebacterium glutamicum B253
Brite
KEGG Orthology (KO) [BR:
cgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgx03016
]
SB89_10780
Enzymes [BR:
cgx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SB89_10780
Transfer RNA biogenesis [BR:
cgx03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SB89_10780
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AJE67990
UniProt:
A0AB36I5P9
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All DBs
Position
complement(2326122..2326673)
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AA seq
183 aa
AA seq
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MRLFASITPPIEVTEHLINALRPYKDDLRWSDPDNWHITLAFYGELPDGAVEDLIEHLTS
AARINEEFTIRIKGAGSFNRKNLWMGVGGDTKDLRRLMADCLIDPEERRRQRAHLTVAKP
TQRQRSRDWDPVIPDLVHALSIYEGPEWPVDEIELVSSEPGKGRSGGPLYTTVATIALSS
ALV
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagactgttcgcgtctatcactccgccgattgaagtcaccgagcatctgatcaacgcg
cttcgtccctacaaggatgatctgcggtggtctgatccagacaattggcacatcacgttg
gcgttctatggagaattacctgatggggcagtcgaagatctcattgaacatctgacaagt
gcagcccgaatcaatgaagaattcaccatcagaatcaaaggcgcaggctcatttaatcgg
aagaatttgtggatgggtgttggtggtgacaccaaagatctgcggcgactgatggctgat
tgcctcattgatcctgaggaacgccgacgccagcgtgcacacctgaccgtggcgaaacca
acgcagcgacagcgcagccgcgattgggatcctgtcatccccgatctggtccacgctctc
tctatctacgaaggccccgaatggccagtcgatgagattgaactggtgtcttctgaacct
ggaaaaggcagaagcggtgggccactgtatacaaccgtggccaccattgcgttgtcatct
gcgctggtttaa
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