Corynebacterium glyciniphilum: CGLY_03430
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Entry
CGLY_03430 CDS
T03073
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cgy
Corynebacterium glyciniphilum
Pathway
cgy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGLY_03430 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgy03021
]
CGLY_03430 (rpoC)
03400 DNA repair and recombination proteins [BR:
cgy03400
]
CGLY_03430 (rpoC)
Enzymes [BR:
cgy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGLY_03430 (rpoC)
Transcription machinery [BR:
cgy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGLY_03430 (rpoC)
DNA repair and recombination proteins [BR:
cgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGLY_03430 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AHW63134
UniProt:
X5DPB6
LinkDB
All DBs
Position
747517..751488
Genome browser
AA seq
1323 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHVELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAANIITSVDEEGRHNDQTTLEAEMLVEKKEVENERDADLADRSEKLEAD
LAELEAAGAKADAKRKIQTAAEREMRHIRERAEREVERLDEIWNTFVKLAPKQMIVDEGI
YTELVDRYEDYFTGGMGAESIQTLIRSFDLEAEAEKLREIIRDGKGQKKLRALKRLKVVA
AFLRSGNDPAGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMLDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVMKRLVEKSYAQNIKSAKRMVERQR
PEVWDVLEDAIAEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSDEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYFLTLQKTTDELGGE
GAYTPADENGPERGVYSTLSEAIMARDRGVLGLQAPIKVRIDHLRPPEDVEAEQFPDGWQ
KGQVWLAHTTLGRVLFNELLPWNYPFVDDVMAKKPQAAVINDLAAKYPMITVAQTVDKLK
DAGFYWATRSGVTITMHDVLVLPNKKEILDRYEERARVIEKKMARGKINATERYNSLVDL
WKEATDFVGESVEQLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVTNSRGDYITRPIK
TSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCATSKGV
TIPLAEAVLDAEGNETGKFRRAEFVETAATGRFLAADAVDAAGNVVIPAGQDLGDPEIQR
LVDAGVATLKVRSVMTCDTATGVCATCYGRSMATGKKVDIGEAVGIVAAQSIGEPGTQLT
MRTFHQGGVGGDITGGLPRVQELFEARVPKAKAPIASVDGKVRIEDDDNFYTLTIIPADG
SDEVVYEKLSKRQGLAVIKVGDFERQIKDGDSVVRGQQLLKGSADPHEVLRVMGRRGVQQ
HLINEVQKVYRDQGVAIHDKHIEIIVRQMLRRVTVIDSGSTEYLPGSLVDHADAVSASKA
AVQTGGRPVEVRAEIMGITKASLATDSWLSAASFQETTRVLTDAAINKRSDKLIGLKENV
IIGKLIPAGTGIAKYRNIAVEPTEEARAAAYQLPSTFGDGFYGDDSYGEFTGAAVPLDDI
DLN
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacttctttgacgaactgcgtattggtctcgcgaccgccgatgacatc
cgtcgttggtcacatggcgaggtcaagaagccggagactatcaactaccgcaccctgaag
cccgagaaggacggtctgttctgtgagcggatcttcgggccgacccgtgactgggagtgt
gcctgcggtaagtacaagcgtgtccgttacaagggcatcatctgcgagcgctgcggcgtc
gaggtgaccaagtccaaggtccggcgtgagcgcatgggccatgttgagctggccgccccg
gtcacccacatctggtatttcaagggtgtcccgtcgcgcctcggatacctgctcgacctt
gccccgaaggatctcgagaagatcatctacttcgcggcgaacatcatcacctccgtcgac
gaggaaggtcgtcacaacgaccagaccaccctcgaagcagagatgctggtcgagaagaag
gaagtcgagaacgagcgcgacgcagacctcgccgaccggtccgagaagctcgaggctgat
ctggctgagctcgaggccgccggtgccaaggcggacgcgaagcgcaagatccagaccgcc
gccgagcgcgagatgcgccacatccgtgagcgcgccgagcgtgaggtcgagcgtctcgac
gagatctggaacaccttcgtcaagctcgccccgaagcagatgatcgtcgacgagggcatc
tacaccgaactcgtcgaccgctacgaggactacttcaccggtggaatgggcgcagagtcc
atccagaccctcatccgctccttcgacctcgaggcagaggccgagaagctgcgcgagatc
attcgcgatggcaaggggcagaagaagctgcgcgctctcaagcgcctcaaggtcgtcgcc
gcattcctgcgttccggaaacgaccccgcgggcatggttctcgacgcagtcccggtgatc
ccgccggagttgcgcccgatggtgcagctcgacggtggccgtttcgcgacctccgacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgtctcaagcgcatgctggacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtcggtcgacgcg
ctcttcgacaacggtcgtcgcggtcgcccggtcacgggccccggcaaccgtccgctgaag
tcgctgtctgacctgctcaagggcaagcaggggcgcttccgtcagaaccttctgggtaag
cgtgtcgactactccggtcgttcggtgatcatcgtcggcccgcagctgaagctgcaccag
tgtggtctgccgaagcagatggccctggagctcttcaagccgttcgtgatgaagcggctc
gtcgagaagtcctacgcacagaacatcaagtccgccaagcggatggtggagcgccagcgt
cccgaggtgtgggacgtgctcgaggacgccatcgccgagcacccggtgatgctgaaccgt
gcccccaccctgcaccgtctgggcatccaggcgttcgagccggtcctggtcgagggtaag
gcgattcagctgcacccgctggcgtgtgaggccttcaacgctgacttcgacggtgaccag
atggcggtccacctgccgctgtccgacgaggcacaggccgaggctcgcatcctcatgctc
gcctcgaacaacatcctctctccggcgtcgggtaagccgctggccatgccccgtctggac
atggtgaccgggctctacttcctgaccctgcagaagaccaccgacgagctcggtggagag
ggtgcctacaccccggccgacgagaacggtccggagcgcggtgtctactcgacgctgtcc
gaggccatcatggcccgcgaccgcggcgtgctgggcctgcaggccccgatcaaggtccgc
atcgaccacctgcgtcctccggaggacgtggaggccgagcagttccccgacggctggcag
aaggggcaggtctggctggcgcacaccacgctgggtcgcgtgctcttcaacgagctgctg
ccgtggaactacccgttcgtggacgacgtcatggccaagaagccgcaggccgcggtcatc
aacgacttggccgcgaagtacccgatgatcaccgtcgcgcagaccgtggacaagctcaag
gacgccggcttctactgggctacccgttccggcgtgaccatcaccatgcatgacgtgctg
gtcctgccgaacaagaaggagatcctcgaccgttacgaggagcgtgcccgtgtcatcgag
aagaagatggcccgcggcaagatcaacgcgacggagcggtacaactccctggtcgacctg
tggaaggaagccaccgacttcgtcggtgagtctgtcgagcagctgtacccggacgacaac
ccgatcccgatgatcgtgaagtccggcgcggccggcaacatgcgtcagatctggacgctg
gccggtatgaagggcatggtcacgaactcgcgtggtgactacatcacccgcccgatcaag
acctccttccgtgagggcctgtccgtgctggagtacttcaacaactcccacggttcccgt
aagggcctcgccgacaccgcgctgcgtaccgccgactcgggttacctgacccgtcgtctg
gtcgatgtcgcgcaggacgtcatcgtccgcgaggacgactgtgccacgagcaagggtgtc
accatcccgctcgccgaggccgtcctggatgccgaaggcaacgagaccggcaagttccgt
cgggcggagttcgtcgagaccgctgccaccggccgcttcctcgctgccgatgcagtggac
gccgcaggtaacgtcgttatccctgccggtcaggatcttggagacccggagatccagcgg
ctggtcgatgccggtgttgcgactctcaaggtccgctcggtgatgacctgcgataccgcg
accggcgtgtgcgctacctgttacggccgttccatggcgaccggtaagaaggtcgacatc
ggtgaggccgtcggcattgtcgccgcgcagtccatcggtgagcccggaacacagctgacc
atgcgtaccttccaccagggtggtgtcggtggagacatcaccggcggtctgccccgtgtc
caggagctgttcgaggcacgtgttccgaaggccaaggccccgatcgcctcggtcgacggt
aaggtccgcatcgaggacgacgacaacttctacacgctgacgatcatccccgcggatggt
tcggacgaggtcgtgtacgagaagctgtcgaagcgccagggcctggctgtcatcaaggtc
ggcgacttcgagcggcagatcaaggacggcgacagcgtcgttcgcggccagcagctcctg
aagggctcggccgatccgcacgaggtacttcgcgtgatggggcgtcgcggcgtccagcag
cacctgatcaacgaggtccagaaggtctaccgtgatcagggtgtggccattcacgacaag
cacatcgagatcatcgtgcgccagatgctgcgccgcgtgaccgtcatcgactcgggctcg
acagagtacctgccgggttcgctggtggatcacgctgacgcagtctcggcttccaaggct
gctgtccagaccggtggccgcccggtggaggtccgtgccgagatcatgggtatcaccaag
gcgtcgctggctaccgattcgtggttgtcggccgcgtccttccaggagacgacccgtgtt
ctcaccgatgcggcaatcaacaagcgctccgacaagctcatcgggctcaaggagaacgtc
atcatcggtaagctcatcccggccggtacgggcattgcgaagtaccgcaacatcgccgtg
gagccgacggaggaagctcgcgcagctgcataccagctgccgtcgacgttcggtgacggt
ttctacggagacgactcctacggagagttcaccggtgccgccgttccgctcgacgacatc
gacctgaactga
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