Corynebacterium glyciniphilum: CGLY_03900
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Entry
CGLY_03900 CDS
T03073
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cgy
Corynebacterium glyciniphilum
Pathway
cgy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGLY_03900 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgy03021
]
CGLY_03900 (rpoA)
03400 DNA repair and recombination proteins [BR:
cgy03400
]
CGLY_03900 (rpoA)
Enzymes [BR:
cgy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGLY_03900 (rpoA)
Transcription machinery [BR:
cgy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGLY_03900 (rpoA)
DNA repair and recombination proteins [BR:
cgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGLY_03900 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AHW63228
UniProt:
X5DJG5
LinkDB
All DBs
Position
837576..838589
Genome browser
AA seq
337 aa
AA seq
DB search
MLISQRPALSEEFVSPARSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIEGVL
HEFTTIPGVKEDVSDIILNIKSLVLSSDSDEPVTMYIRKEGAGEVTGADVVAPTGVEVHN
PDLHIATLNEQGKIDIELVVERGRGYVPAAPTTGEIGRIPVDQIYSPVLKVSYKVEATRV
EQRTDFDKLVIDVETKNSITARDAMASAGKTLVELFGLAQELNLAAEGIEIGPSPMETEH
IAAYSTPIEDLDFSVRSYNCLKREDIHTVGELAGRTESDLLDIRNFGQKSINEVKVKLAE
LGLGLKDAPEGFDINDIEGYDPESGEFVDTEGEDIAE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttcacagcgcccggcgttgagcgaagagttcgtcagtcctgcccggtcccgg
ttcgtcatcgagccgctggagcccggtttcggctacaccctcggcaactcactgcgccgt
accctgctgtcgtccatcccgggcgcagcggtcacctccatccggatcgagggtgtgctc
cacgagttcaccaccatccccggcgtcaaggaggatgtctccgacatcatcctgaacatc
aagtccctggttctgtcctcggattctgatgagccggtcacgatgtacatccgcaaggaa
ggtgccggtgaggtcaccggggcagacgtcgtcgccccgaccggtgtggaggtccacaac
ccggacctgcacatcgccaccctcaatgagcagggcaagatcgacatcgagctcgtcgtc
gagcgcggtcgcggatacgtcccggccgcccccaccaccggtgagatcggccgcatcccg
gtcgaccagatctactccccggtgctgaaggtcagctacaaagtcgaggcaacccgtgtc
gaacagcgcacggacttcgacaagctggtcatcgacgtcgagaccaagaactccatcacc
gcccgcgacgccatggcgtccgcaggcaagaccctggtggagctgttcggtctggcccag
gaactcaacctggctgctgaaggtatcgagatcggcccgtctccgatggagaccgagcac
atcgccgcctacagcaccccgatcgaggacctcgacttctccgtgcggtcgtacaactgc
ctgaagcgtgaggacatccacaccgtcggcgaactcgccggacggaccgagtccgacctg
ctggatatccgtaacttcggtcagaagtccatcaacgaggtgaaggtcaagctcgctgag
ctcggcctgggcctcaaggacgcacccgagggcttcgacatcaacgacatcgagggctac
gacccggagtccggcgaattcgtcgacaccgagggcgaagacatcgccgagtag
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