Corynebacterium glyciniphilum: CGLY_04710
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Entry
CGLY_04710 CDS
T03073
Name
(GenBank) Putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgy
Corynebacterium glyciniphilum
Pathway
cgy03420
Nucleotide excision repair
cgy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGLY_04710
03430 Mismatch repair
CGLY_04710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgy03400
]
CGLY_04710
Enzymes [BR:
cgy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGLY_04710
DNA repair and recombination proteins [BR:
cgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGLY_04710
MMR (mismatch excision repair)
Other MMR factors
CGLY_04710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHW63390
UniProt:
X5E7J0
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All DBs
Position
1018779..1022351
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AA seq
1190 aa
AA seq
DB search
MGTIGPNELSMMLGQQFGPTPQQAAVIGADPGPTLVVAGAGAGKTETMAARVVWLVANGL
VAPEQVLGLTFTRKAARELGQRIRRRLQTLADSGFLDTLPVDDPRHEALHNIIPTVSTYD
AYAGSVVREYGLLLPMEPAGRIISDTERWMIARDVVSDWPTGFTTSRSLPSIIDDMLDLS
DEMDNHLVGADRVAEECRVTAAEIDGLPDRDGKALKGVDTTLEAINGALTYRQELLGLVA
AYRDTLSERNLMTFGQQMSKAAQLVQSHDRVGEAQRRRFRVVMLDEYQDTGHAQRVLLQN
LFGNGTDPALTVTAVGDPMQSIYGFRGATAANLAHFRTDFPTATGPAPTLELTTSWRNPA
RVLDLANTVSRWSMNTDSPMVSPLSARPGAGTGEVKLGWFDTREEELDWLADDLAARYRE
HREQKADGGAPFSAAVLLRKNADAQPIHDLLRARGVPVDMTAGPGLLDVPEVADVFATLR
VLVDPGDDIAVLRLITGVRWNIGAADVLALARRVDQLSRRDGRAVSGDAAVSSDESTGAS
GFTALVTEQAGDSPALATVRRRLAEIDRDSHRVSVGLAEALADLRGMEDFGMSTEGARRL
GELGRELRFLRRHSLAKPLTDLVADIENMTGVRTEVLTRYHRSTDRSIGTSHLDKFAEVV
RSFSELSASSPAALVDYLRSASAREKGLDPGEVEVRTDCVQLLTVHKAKGLEWEIVAVPH
ATRKTYADAVKRPGVTSWTTNARILPSGLRGDAATGPDDVTGAPVLDLSDVEDRKGVVEA
QDRFKVELGVHGAQEDDRLFYVAVTRSEQTLLVSGAAFNNADKKPVDPSVALTLLRDRAR
ASHPESIVTWSDLGMEYSKTELRRLENGPHHREDQVMVPDNPAARNDLIAEVHRDAPAAP
TAVWPRPVLTDPEREGAAAVADGIRRVRAARAGIAAEEPGRRAPDAGTLADQWEQETSVL
IDEYRAGAVPEVVVPLGTRLTATEAVSLSRDRAEFARRRRRPVPMEPRPYTKRGTAFHNW
VEKQYGVASLLDEDELPGAADATLTDPALDHLKQRFLDSEWAQRTPETVEGAYSVTLAGH
VFEGRIDAVFRDGDGWFVVDWKTGRRPSGAELASAELQLAVYRLAWAKVQSVRLGRPVPP
ESVRAAFHYVLANETYEPGTLPTSAQLAALIGQDHGDGAEGSGDREGQQW
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
gtgggcacgatcggcccgaacgaattgtcgatgatgctgggccagcagttcggccccaca
ccgcagcaggcagccgtcatcggagcggatccaggaccgacgcttgtcgtcgccggtgcg
ggtgcaggaaagaccgagacgatggcggcacgcgtcgtctggctcgtcgccaacggactc
gtcgccccggaacaggttctcgggctgacgttcacgaggaaagcggcgcgggaactggga
caacggatccgccgccggctgcagacactggccgactcgggttttctcgacaccctcccc
gtggacgatccccgccatgaggcgctgcacaacatcatccccacggtgtccacctacgac
gcctacgccggatcggtcgtgcgcgaatacggccttctcctgccgatggagcccgccggg
cgcatcatctccgacacggaacggtggatgatcgcccgcgacgtcgtcagcgactggccg
accggattcaccacctcccggtcactgccgtcgatcattgacgacatgctggacctctcc
gacgagatggacaaccacctcgtcggtgccgaccgggtcgccgaggaatgtcgtgtcacc
gctgcggagatcgacggactgcccgaccgggacggcaaggcgctcaagggcgtcgacacc
actctggaggcgatcaacggtgccctgacctaccgtcaggaactgttgggcctggtcgcc
gcctaccgggacaccctcagtgaacgtaacctgatgacctttggacagcagatgtccaag
gcggcccagctcgtccagtcccatgaccgtgtcggagaggcgcagcgccgccgtttccgg
gttgtgatgctcgacgagtaccaggacaccggccacgcccaacgggtgctgctgcagaac
ctcttcggcaatggcactgatcccgcactcaccgtcaccgctgtgggcgacccgatgcag
tccatctacggtttccgcggtgcgaccgccgccaacctcgcccatttccgcactgatttc
ccgaccgccaccggtcccgcaccgacactcgaactcaccacctcctggcgtaatcccgcg
cgggtcctggacctggcgaacacggtgtcgcggtggtcgatgaacaccgacagccctatg
gtgtcgccgctgtcggcgcgtcccggggccggcaccggggaggtgaagctcggctggttc
gacacccgtgaagaggaactcgactggctcgccgatgacctggcggcccgttaccgggag
caccgggaacagaaggcggacggtggcgcaccgttctccgccgctgtcctgttgcggaag
aacgccgacgctcaaccgatccatgacctgttgcgtgccaggggcgttcccgtcgacatg
acggccgggcccgggctgctcgacgtccccgaggtcgcagacgtcttcgccaccctccgg
gtcctcgtcgaccccggtgacgacattgccgtactccggctgattaccggggtgcgctgg
aacatcggcgcggccgatgtactcgctctagcccgacgcgtcgaccagctctcacgacgg
gacggccgcgcggtcagtggtgacgccgccgtatcctcggacgagtcgaccggggcgagc
ggcttcaccgccttggtcactgagcaggccggtgactccccggcgttggcgaccgtgcgc
cgcagactcgccgagatcgaccgcgacagtcacagagtgtcggtcggcctggccgaggca
ttggctgacctgcgcggtatggaggacttcgggatgtccaccgagggcgcccgacgtctc
ggcgaactcgggcgggaactgcggttcctacggcggcattccttggcgaaaccgctcacg
gacctcgtcgccgacatcgagaacatgaccggggtccgcaccgaagtcctgacccgctac
caccgcagtaccgaccggtcgatcggcaccagtcacctcgacaagttcgccgaggtcgtc
cggtcgttctccgaactcagcgcatcgagccctgctgccctggtcgactatctgcgctcg
gcctccgccagggagaaagggctcgatcccggggaagtggaggtgcggaccgactgcgtc
cagctgctcaccgtgcacaaggccaaggggctggagtgggagatcgtcgccgtcccccac
gccacccggaagacctacgccgacgccgtcaaacgtcccggcgtgacgtcctggacgacc
aatgcacggatcctgccgtcagggttgcgcggggacgccgccactggtccggacgacgtc
accggtgcaccggtgctcgatctcagcgatgtcgaggaccgtaagggcgtggttgaggcg
caggacaggttcaaggtcgagctcggtgtgcacggtgcgcaggaggacgaccgcctgttc
tacgtcgcagtcacccgcagcgaacagaccctcctggtcagtggggcggcgttcaacaac
gccgacaagaagcccgtggacccctcggttgcgctcacccttctgcgcgaccgtgccagg
gccagtcacccggagtccatcgtcacctggtctgacctgggcatggaatactccaagaca
gagctccggcgcctggagaacggcccgcaccaccgggaagaccaggtgatggtgccggac
aacccggccgcacgcaatgatctcatcgccgaggtgcaccgtgacgcgcctgctgcgccg
acggcggtgtggccgcgtcccgtcctcacagatccggagcgggagggggcagcggccgtg
gcggacggcatccggagggttcgggcggcgcgtgcaggcatcgccgccgaggagccgggc
cgacgcgccccggacgcaggcacgcttgcggaccagtgggagcaggagaccagcgtgctg
attgacgagtaccgtgccggtgctgtccccgaggtcgtcgttccgctgggcacccgtctc
actgcgaccgaagcggtctcattgtctcgcgaccgtgccgagttcgcccgacgccgacgg
cgtccggtgccgatggagccgcgcccgtacacgaagaggggtaccgcgttccacaactgg
gtcgagaagcagtacggcgtcgcgagcctcctcgacgaggacgagctgcccggcgccgca
gacgcgaccctgaccgaccctgcgctggaccatctcaagcaacgcttcctcgacagcgag
tgggcgcagcgcacacccgagaccgtggaaggagcctactccgtcaccctcgccggtcac
gtgttcgagggacgtatcgacgctgtgttccgggacggggacgggtggttcgtcgtcgac
tggaagacgggacgccgccccagtggtgctgaactcgcctccgccgagctgcaactggcc
gtctaccgtctggcgtgggcgaaagttcagtcggtccgactgggacgtccggtgcctccg
gagtcggtccgggccgccttccactacgtgctcgccaatgagacctatgaaccgggtaca
ctgccgacatcagcgcaactggccgcactgatcggtcaggaccacggcgacggtgcagag
ggtagcggagacagggaggggcagcagtggtga
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