Corynebacterium glyciniphilum: CGLY_06610
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Entry
CGLY_06610 CDS
T03073
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cgy
Corynebacterium glyciniphilum
Pathway
cgy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGLY_06610 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgy03019
]
CGLY_06610 (deaD)
03009 Ribosome biogenesis [BR:
cgy03009
]
CGLY_06610 (deaD)
Enzymes [BR:
cgy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CGLY_06610 (deaD)
Messenger RNA biogenesis [BR:
cgy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CGLY_06610 (deaD)
Ribosome biogenesis [BR:
cgy03009
]
Prokaryotic type
rRNA helicases
CGLY_06610 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
AAA_22
UvrA_inter
Cas3-like_C_2
adh_short
RecX_HTH1
Motif
Other DBs
NCBI-ProteinID:
AHW63767
UniProt:
X5DSX1
LinkDB
All DBs
Position
1389411..1391543
Genome browser
AA seq
710 aa
AA seq
DB search
MSETENVTGDEKMPETSQSSVPQENLHEDAASPVTGSPDLGDVVGAEIPESTVDGDVTEK
NIRTENEKTDEDAADTNGFDSLGLPQKILDAVAGVGFTTPSPIQASTIPPLMEGRDVVGL
AQTGTGKTAAFALPALSRLDPHQRTPQVLVLAPTRELALQVADSFESFANQLGGISVLPI
YGGAPYGAQLSGLRRGAHVVVGTPGRVIDHLEKGSLDLSGLRFLVLDEADEMLNMGFQDD
VERILSDTPDNRQVALFSATMPSAIRRLSKQYLNDAAEITVKSTQRTAENIEQDYLYVTY
RNKLNALTRILEVTDFEAMILFVRTKNDTEEIAEKLRERGFDAAAINGDIPQNQRERTVD
QLKDGRLDILVATDVAARGLDVERITHVFNYDIPRDTESYVHRIGRTGRAGRHGRAILFV
TPREGRLLKNIERATKSKLNEIELPGVDKVNEARKNKFHASITEARKGKQVDTFRELIST
YAEENEVDPTEIAAALAAKLQGKEPLYMEEIQEPPRRERRDRNDRQDRRDGSEAQSGVHR
PFKERFNKQAPTVTDRNGKSLSVYRIGVGHRQRVRPGAIVGALANEGNMNSRDFGRISIF
SEHSLVELPSDLPKEVFESLDQTRISGKLINIEPDPGAPAGHPARHRQDGDRGGHRGGGR
PRGDRGERGGRGRNDRNDRGGRFDRDRSDRDRGDRGGRGSYRGNRGARRD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaactgagaacgtgaccggcgacgagaaaatgccggaaacctcccagtcgtca
gtacctcaggagaatctgcacgaggatgccgcctccccggtcacggggtcgccggacctc
ggtgacgtagtgggcgcagagattcccgagagcactgtggacggggacgtcaccgagaag
aacatccgaacagagaacgagaagaccgacgaggacgcggccgacaccaacggcttcgat
tctttgggtctaccgcagaagatccttgacgccgtcgcaggcgtcgggttcaccacgccg
tcgccgatccaggcgtccaccattccgcccctgatggaggggcgggacgtggtgggtctg
gcgcagacgggtaccggcaagaccgcagcgttcgcgctgccggccctgtcgcgtcttgat
ccccatcagcgtaccccgcaggtcctggtcctcgcccctacgcgagagctcgcgctgcag
gtcgccgattccttcgagtctttcgccaaccagctcggcggcatcagcgtgctgccgatc
tacggtggtgccccctatggtgcccagttgtcgggtctccgtcgtggcgcacacgtggtg
gtcggcacgccggggcgcgtgatcgatcacctggagaagggcagcctggacctgtctggt
ctgcgcttcctcgtcctcgacgaggccgacgagatgctcaacatgggcttccaggacgat
gtcgagcgtattctgtccgacactccggacaaccgccaggtcgcgctgttctcggctacg
atgccgtcggcgatccgtcgtctttccaagcagtacctcaatgatgctgccgagattacc
gtgaagtccacgcagcgtaccgcggagaatatcgaacaggactacctgtacgtcacctac
cgcaacaagctcaatgcgctgacccgcattcttgaagtcacggacttcgaggcgatgatt
ctcttcgtccgtacgaagaacgacaccgaagagatcgccgagaaattgcgcgagcgcggt
tttgatgcggccgccattaacggcgacattccgcagaaccagcgtgaacgtaccgtcgac
cagctgaaggacgggcgtctcgacatcctggtcgccaccgatgtcgctgcccgcggactc
gatgttgagcgcatcacccatgtgttcaactacgacattccgcgcgataccgagtcttat
gtccaccgcatcggccgcaccggacgtgccggccgtcacggacgtgcaatcctgtttgtc
accccgcgtgaaggacgcttgctcaagaacatcgagcgagcgaccaagtccaagctcaac
gaaattgagcttcccggcgtcgacaaggtcaacgaagcgcgcaagaacaagttccacgcg
tcgatcaccgaggcccgcaagggcaagcaggtcgatacgttccgcgaactgatctcgacc
tacgctgaagagaacgaggtcgaccccacggaaatcgctgccgcacttgcagcgaaactg
cagggcaaggaacccctctacatggaggagatccaggagcctccgcggcgggagcgtcgt
gaccgcaatgaccgacaggatcgtcgggacggttctgaggcgcagtccggtgttcaccgt
cccttcaaggagcggttcaacaagcaggcacccacggtcaccgaccgtaacgggaagtcc
ttgtctgtgtaccggatcggtgtcggccaccgtcagcgcgtacgtcccggcgcgattgtc
ggagctctcgccaacgagggcaatatgaactcccgtgacttcggccggatcagcatcttc
tccgagcactccttggttgaactgccgtccgatctgccgaaggaagtcttcgagtctctc
gaccagacgcgcatttccggcaagctgatcaacatcgagcccgatcccggcgctccggca
ggccacccggccaggcaccgccaggacggggatcgtggcggacaccgcggcggtggacgt
cctcgtggtgaccgtggtgaacgcggaggacggggtcgcaacgaccgaaacgaccggggc
ggacgtttcgaccgtgaccggagcgaccgcgatcgcggcgaccgcggtggacgaggcagc
taccggggtaaccgtggagcccgccgggactga
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