KEGG   Corynebacterium glyciniphilum: CGLY_12660
Entry
CGLY_12660        CDS       T03073                                 
Name
(GenBank) Putative ATP-dependent helicase lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cgy  Corynebacterium glyciniphilum
Brite
KEGG Orthology (KO) [BR:cgy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgy03400]
    CGLY_12660
Enzymes [BR:cgy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CGLY_12660
    5.6.2.6  RNA 3'-5' helicase
     CGLY_12660
DNA repair and recombination proteins [BR:cgy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CGLY_12660
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr Helicase_C WH2_Lhr ResIII AAA_25 DUF6406 PhoH
Other DBs
NCBI-ProteinID: AHW64972
UniProt: X5DWI2
LinkDB
Position
complement(2731251..2736095)
AA seq 1614 aa
MTDPLDRFSTPVASWFREVFTEPTVVQSRAWDAISRGDNALVVAPTGSGKTLAAFLWALS
RLSSEGLMKERQDRNTGTRVLYISPLKALGVDVERNLQVPLAGIARTAAATGTDIAPVRV
GVRSGDTPQAERAKLLRTPPDVLITTPESLYLMLTSKAAGTLRDVDTVIIDEVHAVAGTK
RGTHLALSLERLEQLSDTGVQRIGLSATVNPVDTVAAFLGGDRPVTVVNPPAQKLWDVRV
RSVVEDFQDPPAVEDVSAAAEEDGEDTGRDASTPVDEALLGPSLIGEGIGGVTDVGSGSR
VASGVDRESALPQQKSVWPHVQRAIYEQVMDNRSTLVFVNARRTAERLTGALNEMWAEEH
DPGSLAAPTRRDPAQLMAQSGAVPAAPQVIARAHHGSVSKDERADIEAALKDGSLRCVVA
TSSLELGIDMGLVDHVIQVGAPPSVSSAVQRCGRAGHSVGAVSRATIYPLHRQDAEAATV
IVDRMLAGDLEPLQVVSNALDVLAQQTVAVAAQFAAGGGDGESTVDVEDWFRTVRRAHPY
AALPREAFDGVVELVSGRYPSTDFAELRPKVIYDASTGRFEARPGAQRTAVTSGGTIPDR
GLFGVFLPADGENAGGRRVGELDEEMVYESRVGDVFTLGASSWRIAEITRDQVIVTPAAG
HTGRLPFWVGDAEGRPAELAPVIGAARRAWGGGGAGDLRGADFLDDNTRQNLDAFYSGQR
EATQVVPDERTILIERFHDEVGDWRVVVHTPWGRSVNAPWALAIGASLSRRSGIDAMAVA
GDDGIVLRLPYTEEAPGAELLTGDRSGADTAPVVAEVTESVGSSALFAGRFRECAARALL
LPRRNPGKRQPLWQQRQRAAQLLDVARPHPEFPIMVETMRECLRDVYDLPALEKVVAAVG
TRSMRVAEISTDTPSPFAESLLFSYTGAFLYEGDSAERAAALTVDPALLAAVLGARGEGL
VLDPDVVAEVVESLQWLSEGRRARSAEQVVDMLRALGPLAPAEVARRTEDPQGIVLPEVQ
TMIPRRICEVKVGGVLRWAVVEDITLLRDGLGIPVPPGVPAARDTVSDAVDQLVLRWART
HGPFTAADVATEFGLGVATADSLAKRWVSGRRLESHEDQYVDAGVLRRLRAATLAKARGA
LEPVSVQTYAAVLADWHGLGAGEREDLSGVIEQLAGVALPASAWETVVLPARIPGYRTND
LDDLVASGEILVIGAGATSATDPRIMLLPADLAPLLVEGMDGVEDGEDQNALGSVAALVR
DRVSGGGAFLASEIERGLSTDETSQAQHLHSHDVVDSAIWELFDAGKLMPDSFAAVRARL
AGTGITDRAGSGGSSRGSGAHKAPRRNRGRGTTRRLRMGRSTFAQTVASEEVRSRRAAMN
AHSGVPGRWSQVPEKAGAATDRAIATGEAWLDRYAVVTRGSVMSEHTEGGFAAAYRMLTA
WEDNGTVLRGYIVDGLGGAQFASREIIDQLRRVEESTGAGAEAATSPVLLAASDPANPYG
AAVPWPELPTEDASRPTRGAGALVVLREGRLLAHLTRGGRTVTVFTRPTLSDGPASPDPG
DVAAVVAVLSDAVQAGRLSPVTVERINGMDVMGVATSMWTEAGARLTPKGLIVR
NT seq 4845 nt   +upstreamnt  +downstreamnt
atgaccgatccccttgaccgtttctcgacgccggtggcctcctggttccgggaggtcttc
accgagccgacggtggtgcagtcccgggcgtgggatgcgatcagccggggcgacaacgcg
ctcgtcgtcgcccccaccgggtcgggtaagacgttggcggcgttcctctgggccttgtcg
cggctcagttcggaagggttgatgaaggagcggcaagaccggaacaccggtacccgggtg
ctctacatttcaccactgaaggcgcttggtgtggatgtggaacgcaacctgcaggtccct
ctggccgggatcgcccggaccgcggcggccacgggcacggacatcgctccggtgcgtgtc
ggagtgcgctcgggggacactccccaggccgagcgggcgaaactgctgcggaccccgccg
gatgtactgatcaccacgccggagtcgttgtacctcatgctcacctcgaaagccgcaggc
acattgcgggacgtggacacggtgatcatcgacgaggtgcacgcggtcgcaggcacgaag
cggggcacccacctggcgctcagcctggaacggctggaacagctcagtgacaccggcgtc
cagcgcatcggcctgtcggccacggtgaatccggtcgacaccgtcgccgcattcctcggc
ggtgaccgtccggtgacggtggtcaaccctcccgcacagaaactgtgggacgtccgcgtg
cgcagtgtggtcgaggatttccaggacccccctgcggtggaggacgtgtcggctgcggca
gaagaagacggagaagacacaggacgtgacgcgagcactcctgtcgacgaggcactgctc
ggcccctccctgatcggcgaggggatcggcggggtcaccgatgtcggcagcggcagccgg
gtcgcctccggtgtggaccgggaatcggcgttgccacagcagaagtccgtctggccgcat
gtgcagcgggcaatctacgagcaggtgatggacaaccgttccacgctggtgttcgtcaac
gcccggcgcactgccgagcgccttaccggtgccctcaacgagatgtgggctgaagaacat
gaccccgggtcactggctgctccgacccgtcgtgacccggcacagctgatggcgcagtcc
ggtgcggttccggccgcgccacaggtcatcgcccgcgcgcatcacggctcggtgtccaaa
gacgaacgcgcagacatcgaagcggcgttgaaggacggttccctgcgttgtgtggtggcg
acgtcgtcgttggaactcgggatcgacatggggctggttgaccacgtcatccaggtcggg
gccccgccgagcgtctcctcggcggtacagcgctgcgggcgcgccgggcactccgtcggg
gcggtctcccgggcgacgatctacccgctgcaccgccaggatgcggaggcggcgaccgtg
atcgtcgaccggatgctcgccggtgacctcgaacccctgcaggtggtgtccaatgcgctg
gacgtgctcgcccagcagaccgtcgcggtggcggcgcagttcgcggccggaggcggggat
ggcgaaagcacggtggatgtcgaggactggttccgtaccgtccggcgcgcccacccgtat
gcggcgctgccgcgcgaagccttcgacggtgtcgtcgagctcgtgagcgggcgctacccg
tcgacagattttgccgagctccgtccgaaggtcatctacgatgcctccaccggccgtttc
gaggcccgccccggagcacagcgcaccgcggtgacatccggaggcacgattcccgaccgc
ggactgttcggcgtcttcctcccggctgacggtgagaatgccgggggacgccgtgtcggt
gaactcgacgaggagatggtctacgagtcacgggtgggggacgtcttcaccctcggggca
tcgtcgtggaggatcgcagagatcacccgtgaccaggtcattgtcactccggcagccggg
cacaccgggcggttgccgttctgggtcggtgacgccgaggggcgtcccgccgaacttgcc
ccggtgatcggggcggcacgccgggcatggggaggtggcggcgccggggatctcagggga
gccgacttcctcgacgacaacacccgacagaacctcgacgccttctactccggacaacgt
gaggccactcaggtcgtccctgatgagcgcacgattctcatcgaacgtttccacgacgag
gtcggggactggcgggttgtcgtgcacaccccctggggacggtcggtgaatgcgccgtgg
gcgttggcgatcggggcgtccctgtcccggaggtccggtatcgacgccatggctgtcgcc
ggggatgatggcatcgtcctacgtctgccctacaccgaggaggcccccggggcggagctg
ctcaccggcgataggtccggtgctgacaccgcaccggtcgtcgccgaggtgacggagtcg
gtgggttcctcggcgctgttcgccggacgcttccgcgaatgcgcggcgcgggcactgctg
cttccgcggcgtaaccccgggaaacgccagccgttgtggcagcagcgtcaacgcgccgcc
caactgctcgacgtggcgcgaccgcaccccgaattcccgatcatggtggagaccatgcgc
gagtgcctgcgtgacgtctacgacctccccgccctggaaaaggtcgtcgctgccgtgggc
accaggtcgatgcgcgtcgccgagatcagcaccgacaccccctcgcccttcgctgagtcc
ctgctgttcagctacaccggagcgttcctgtacgaaggggactccgctgagcgggcggcg
gcattgacggtggacccggctctgctcgccgctgttctcggtgccaggggtgagggcctt
gtgctggacccggatgtggtcgccgaggtcgtggagtcactgcaatggctttctgaggga
cggcgcgcccgcagcgccgaacaggtggtggacatgctccgtgcactggggccgcttgct
cccgcagaggttgcgcgacggaccgaggacccgcagggaatcgttctgccggaggtgcag
accatgatcccgcgacggatctgtgaagtgaaggtcggtggtgtactgcgctgggccgtt
gtcgaggacatcaccctgctgcgcgacggtctggggatcccggtgccccccggggtcccc
gcagcgagggacaccgtctccgacgccgtcgaccagctcgtcctgcgatgggcgcggacc
cacgggccgttcaccgccgccgatgtcgctaccgagttcggcctgggcgtggccaccgcg
gactcgctggcgaaacgctgggtcagcgggcgacggctggagtcacatgaggatcagtat
gtcgacgcgggtgttctgcgtcggcttcgtgcagccacactggcgaaggcccgcggagcc
ctcgaacccgtgagtgtgcagacctacgccgcggtgctggcggactggcacggtctcggc
gccggcgagcgagaggatctgtccggcgtcatcgaacagcttgccggagtcgccctccct
gcaagtgcctgggaaaccgtcgtgctccccgcgcggatccccggctaccggacgaacgac
ctggatgatctcgtcgcctccggggagatcctcgtcatcggagcgggggcaacctcggcg
accgaccctcggatcatgttgctgcccgccgacctcgcacccctgctcgtagaaggaatg
gacggggtggaagatggtgaggaccagaatgcgttggggtccgtggcggcgctggtgcgt
gaccgggtcagtggcggaggggcgtttcttgcctccgagatcgagcggggactgtctacc
gacgagacgtcgcaggcacagcacctgcacagtcatgacgtcgtcgattccgccatctgg
gaacttttcgacgcgggaaagctcatgcccgactccttcgccgcggtccgtgcccggctg
gccggaaccggcatcaccgaccgcgccggaagcggtggctcctcacgaggatccggggca
cataaagcccctcgccggaaccgggggcggggcactacccggcgactccggatggggcgg
agcaccttcgcacaaaccgtcgcgtccgaagaggtgcggtcccgccgggcggcgatgaac
gcacactcaggcgttcccggccgctggtcgcaggtgccggagaaggccggcgccgcgacg
gaccgtgcgatcgccaccggtgaagcatggctggaccggtacgcggtggtcacccggggt
tcggtgatgtcggagcacaccgagggcggattcgccgccgcctaccgcatgttgaccgcg
tgggaggacaacggcaccgtcctgcgcggctacattgtcgacggactcggcggtgcgcag
ttcgcctcccgcgagatcatcgaccagctgcgccgtgtcgaggaaagtaccggtgccggg
gcggaggcggcgacatcgccggtgctgttggcggcgtcggaccccgcaaacccctacggt
gcggccgtgccctggcccgaacttcctactgaggatgcatcgcgacccacccgcggtgcc
ggtgccctggtcgtcctgcgtgagggacggctcctggctcacctgacccgcggtggcagg
accgtcacggtcttcaccaggccgacactgtccgacgggccggcgtcaccggacccgggg
gacgtggccgccgttgtcgcggttctctcggacgcggtgcaggccggacggctgtccccg
gtcacggtggagcgtatcaacggtatggacgtgatgggtgtcgccacgagcatgtggacg
gaggccggggcacgcctgacaccgaaggggctgatcgtgcggtga

DBGET integrated database retrieval system