Chlamydia gallinacea: M787_000315
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Entry
M787_000315 CDS
T04276
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cgz
Chlamydia gallinacea
Pathway
cgz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M787_000315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgz03021
]
M787_000315
03400 DNA repair and recombination proteins [BR:
cgz03400
]
M787_000315
Enzymes [BR:
cgz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M787_000315
Transcription machinery [BR:
cgz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M787_000315
DNA repair and recombination proteins [BR:
cgz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M787_000315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
ANG65775
UniProt:
A0A173DXW4
LinkDB
All DBs
Position
complement(74410..78591)
Genome browser
AA seq
1393 aa
AA seq
DB search
MFGENSRDINTLSKEGLFDKLEIGIASDVIIRDKWSCGEIKKPETINYRTFKPEKGGLFC
EKIFGPTKDWECCCGKYKKIKHKGIVCDRCGVEVTLSKVRRERMAHIELAVPIVHIWFFK
TTPSRIGNVLGMTASDLERIIYYEEYVVIDPGKTDLNKKQLLNDAQYREVIEKWGKDAFV
AKMGGEAIYDLLKSEDLPSLLKELKDRLRKTKSQQARMKLAKRLKIIEGFVSSSNHPEWM
VLKNVPVVPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKAILRLKTPEVIVRNEKR
MLQEAVDALFDNGRHGHPVMGAGNRPLKSLSEMLKGKNGRFRQNLLGKRVDYSGRSVIIV
GPELKFNQCGLPKEMALELFEPFIIKRLKDQGSVYTIRSAKKMIQRGAPEVWDVLEEIIK
GHPVLLNRAPTLHRLGIQAFEPVLIEGKAIRVHPLVCAAFNADFDGDQMAVHVPLSIEAQ
LEAKVLMMAPDNIFLPSSGKPVAIPSKDMTLGLYYLMADPTYFPEDHGGKVKIFKDEKEV
LRALSVGGFLDEQFENRRDEIGRGLHIHEKIKVRIDGQIIETTPGRVLFNRIVPKELGFQ
NYSMPSKRISELILQCYKKVGLESTVRFLDDLKDLGFIQATKAAISMGLKDVKIPEIKND
ILKEAYDKVAVVKKQYDDGIITEGERHSKTISIWTEVSEVLSDALYVEISKQNKSKHNPL
FLMIDSGARGNKSQLKQLGALRGLMAKPNGAIIESPITSNFREGLTVLEYSISSHGARKG
LADTALKTADSGYLTRRLVDVAQDVIITEKDCGTLNHIEISAIRQGSEELLPLRDRIYGR
TVAEDIYQPGNKSELLAKSGDVLTSAQAEVIDDAGIESIKIRSTLTCESRRGVCAKCYGL
NLANGRLIGLGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAATSSTPEIITNSSGILVYMD
LRVVTGQDGNNLVLNKKGALHVVRDEGRSLEEYKKLLGTKSIESLEAFPVELGVKILVKD
GESVSVGQRIAEVELHNIPIICDKPGYVKCEDLVEGISTEKVVNKNTGLVELIVKQHRGE
LHPQIAIYADADLNELVGTYAIPSGAIISVEEGQKVEAGMLLARLPRGAIKTKDITGGLP
RVAELVEARKPEDAADIAKIDGIVDFKGIQKNKRILVVRDEMTGMEEEHLIPLTKHLIVQ
RGDNVMKGQQLTDGLVVPHEILEICGVRELQKYLVNEVQEVYRLQGVDINDKHIEIIVRQ
MLQKVRITDPGDTTLLFGEEVNKKEFYEENRRTEEDGGKPAQAVPVLLGITKASLGTESF
ISAASFQDTTRVLTDAACSSKTDYLLGFKENVIMGHIIPGGTGFDTHKRIKQYLEQEQEE
LVFDFVSESECAC
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagaaaattctcgagatattaacactttgtcgaaagagggactatttgataag
ttggaaataggaattgcctcagatgttattattcgtgataagtggtcttgtggagaaatt
aaaaagcccgaaacaataaattatcgtacctttaagcccgagaaaggtgggttgttttgc
gagaagatttttgggcccactaaagattgggagtgttgttgcggtaaatacaaaaagatc
aaacacaaagggattgtttgcgatcgttgtggagttgaggttactctttctaaagtgcgg
cgtgaacgtatggctcatattgagctagctgttcctattgtacatatctggtttttcaag
acgaccccttctcgaataggtaatgttttaggaatgacagcatccgacctggaaagaatt
atttactatgaagagtatgtagttattgatccaggtaaaacggacctaaataaaaagcaa
cttttgaacgatgctcaatatcgtgaggttattgagaaatgggggaaagatgcttttgtt
gcgaaaatgggtggagaagctatttatgatttattgaaatcagaagatctccccagtttg
ttgaaagagcttaaagatcgtttaagaaagacaaagtcgcaacaagctcgtatgaagctt
gctaagcgattaaaaattattgaaggttttgtctcatcttctaatcatcctgaatggatg
gtcttaaaaaatgttcctgtagttcccccagatttacgtcctctagtacctttggatggt
ggaagatttgcaacttcggatttaaatgatctttatcgtcgtgtaattaaccgaaataat
cgtctcaaagcgattttgagattgaaaactcctgaagttatcgttcgtaatgaaaagcgt
atgttgcaggaagcagtagatgccttgtttgacaatggccgtcatggacatcctgtcatg
ggagcagggaatcgtcctttgaaatctctttcagagatgctaaaaggaaagaatggtcgt
tttcgacaaaatcttttaggtaaacgcgttgactattccgggcgttctgtaattatcgtt
ggtccagagttgaagttcaatcaatgtggtcttccgaaagagatggcccttgaattgttt
gagccttttattattaagagacttaaagatcagggaagtgtttatacaattcgttctgct
aagaaaatgattcaacggggagctcctgaagtttgggatgttttagaagaaattattaaa
ggtcatcctgtattgcttaaccgagcaccaactctacaccgtttaggaatccaagcattt
gaacccgtactaattgaaggtaaggcaattcgtgttcatcctttagtttgcgcagctttt
aacgctgactttgatggagaccaaatggcggtacacgtacctttatctatagaggcgcaa
ttagaagctaaggtcttaatgatggcaccggataatattttcttgccgtcatctggaaag
ccggtagccataccatcgaaagacatgacgttaggattgtactaccttatggctgatcct
acatatttcccagaggatcatggaggcaaagtcaagatatttaaagacgagaaagaagta
ctgcgcgctctttcggtaggtggttttcttgatgaacaattcgaaaatcgtcgagatgaa
ataggacgagggttgcatattcatgaaaaaattaaagttcgtatagatggtcagattatt
gaaaccacacccggacgtgtattatttaatagaatcgttcctaaagagctcggttttcaa
aattacagcatgcccagcaagcgcataagtgagctgattttacaatgctataaaaaagta
ggcctagaatctacggtgcgtttcttggatgatcttaaagatctagggtttattcaagca
acgaaagctgcaatttctatgggattaaaggatgtcaaaattcctgaaattaagaacgat
attcttaaagaagcttacgataaagtcgccgttgttaagaagcagtacgatgatggtatt
attacagaaggggaacgtcattccaagacaattagtatttggactgaggtgtctgaggtt
ttatcagatgctttatatgtagaaattagtaagcagaataagagcaagcataatccttta
ttcctaatgattgattcgggagctagaggtaataaatcccagttgaagcagttgggagca
ttgcgaggtttaatggcaaaaccaaatggagctattattgaatcccccattacgtcgaat
ttccgtgaagggcttactgttcttgagtactcaatttcttcgcacggagctagaaaaggt
ctagcagatacagcattgaaaacagcagactcaggatatttgacacgtcgtcttgttgat
gtagcccaagatgtcattattacagagaaagattgtggtacattaaatcacattgaaatt
tctgccatccgtcagggatcggaagaattattaccattaagagatcgcatttatggtcgt
acagtagcagaagatatttatcaaccagggaataagagcgagcttcttgctaaaagtgga
gacgtgttaacttctgcacaagcagaagttattgatgatgcaggtattgagagtattaaa
attcgctctacgctgacctgtgaaagtcgacggggagtttgtgctaagtgttacggatta
aatcttgcgaatggccgtttgattggcttaggagaagctgtaggtattattgctgcgcaa
tccattggagagcccggaacacagttgaccatgagaacattccaccttggaggtattgca
gcaacatcttctacgccagaaattataacgaatagttctggtattttggtatacatggac
ttgcgtgtcgttactggtcaagatggcaataatcttgttctgaataagaaaggggctttg
catgtcgttcgtgatgaaggccgaagtttagaggaatacaaaaaactattaggcacaaag
tctattgaaagtttagaggcattccccgtagaacttggagtaaaaattttagtcaaagac
ggagaatctgtatctgtaggacaaagaatagctgaagttgagttacataatattccaatt
atttgtgataagcctggttacgtgaagtgcgaagatttagtagaaggtatttctactgag
aaagtagtcaataagaatacaggtttagtagagttaattgttaagcaacaccgcggggag
ttacatcctcagatagccatttatgctgatgctgacttaaatgaacttgttggaacttat
gctattccttctggcgctattatttctgttgaagaaggacagaaagtggaagcaggtatg
ttattagcaagattgccacggggagctattaagacgaaggatattactggaggtttacct
cgagttgctgaattagtagaagctcgcaaacccgaagatgcggctgatattgcgaaaatt
gatggtattgttgattttaaaggtattcaaaaaaataagcgtattcttgttgttcgtgat
gagatgactggaatggaagaagagcatttgattcctttaacaaaacatcttattgttcag
cgcggtgataatgtcatgaaaggccagcagttgacagatggtttagtggttcctcatgaa
attttggaaatatgtggtgttcgtgaattgcaaaaatacttggtgaatgaggttcaagaa
gtttatcgtctacaaggtgtagatattaatgataagcatattgaaattattgtacgtcaa
atgttgcaaaaagtacgaattactgacccaggagacacaaccttgctctttggagaggaa
gtaaataagaaagagttttatgaagaaaatcgtcgcacagaagaagacggtggtaagcct
gcacaggcggtccccgtattattaggaattactaaggcctctcttggcacagaatccttt
atttctgcggcatccttccaagacacaactcgagtattaactgatgctgcttgtagtagt
aagaccgactatctcctaggatttaaagaaaatgtcattatgggacatatcattccgggg
ggtacagggtttgatactcataagcgtattaagcaatacttggaacaagagcaagaagag
cttgtttttgattttgtaagcgaatctgaatgtgcttgttag
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