KEGG   Chlamydia gallinacea: M787_001775
Entry
M787_001775       CDS       T04276                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
cgz  Chlamydia gallinacea
Pathway
cgz02020  Two-component system
cgz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cgz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    M787_001775
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    M787_001775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgz03021]
    M787_001775
Transcription machinery [BR:cgz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     M787_001775
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: ANG66050
UniProt: A0A173DYQ1
LinkDB
Position
405270..406544
AA seq 424 aa
MFRQEQKLSLKYLPSLRMQQGLHMLQFPITELSSYVLQQIIHNPCFDLCSLEEEDWSPCL
SLPSIEVSRPESLLSHLCTQIQHAFDDPKDIYIAQHIIGNLSEQGLLLLPLQELALQLEV
TIEEISRIQTKIQYFHPLGIASSSLQDYWLFLLKDSHHTLAYTLIKEHYSALRNCDFFHL
AKKFRCSPNYLLESLKNALASIPWAPASGYTSSVASQPALPDVYLKYVEGSWEIRISSRG
LPPIKIDSSILHIYEQLPKQEKKNLKHQILSAKWLIKNLKKREQLLCAIVEKMLPYQENF
LLGRTSAPQAFSVKALANELPYHQSTLFRAIENKTIATPQGIFPLKYLFPQSAVNNTSQS
KEMILQWIHQWIASETSPLSDADISQRIAEHGIPCARRTVAKYRAQLNILPAHKRNKHVK
RIYN
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgtttcggcaagaacaaaaactttctttaaaatacttaccctcattgcgtatgcaacaa
ggattgcatatgcttcaatttcccattactgaattatcttcctatgtcttgcaacaaatt
atacataacccttgttttgacctttgctctttagaagaagaggattggtcgccctgtctg
tccttgccttctatagaagtatcgcgtcctgagtctcttttgtcacatttatgtactcaa
atacaacatgcttttgatgatcctaaagatatctatatcgctcaacacattataggaaat
ctgtccgagcaaggtttattgttacttcctcttcaagagttggcactacaactagaagta
actatagaagaaatttctcgtatacaaactaaaattcaatatttccaccccttagggata
gcttcatcttctctacaagactactggttattccttttgaaagattctcaccacacactg
gcttatactctgatcaaggagcactactctgccctaaggaattgcgatttttttcatcta
gcgaaaaaatttcgctgttctcctaactacctccttgaatctttaaaaaatgcgttagca
tccattccttgggctcctgcttctggctatacatcttctgtagcctctcagccagctctt
cccgatgtgtatcttaaatatgtagaaggtagttgggagattcgtattagctctcgaggt
ttacccccaattaaaatcgactcctcgattttacatatttatgaacagctcccaaaacaa
gaaaaaaaaaatctaaaacaccaaattctttctgcaaaatggctaatcaaaaacttaaaa
aaacgagaacaattactctgtgctattgttgaaaaaatgcttccttaccaagaaaatttt
cttctcgggagaacttctgcacctcaagcgttttctgtaaaagctttagcgaatgagctt
ccctaccaccaatctactttattccgcgctatagaaaataaaactattgccactcctcaa
ggaatttttcctttaaagtatttattccctcagtctgctgttaataatacatctcaatct
aaagaaatgattttacagtggattcatcaatggatagcatctgaaacttctcctttatcc
gacgcagatattagtcaaagaattgcagaacatggtataccttgcgcacgacgtacagta
gctaagtaccgagcacaattaaatattctacctgcacataaacgaaacaaacatgtaaag
cggatttacaattag

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