Campylobacter hominis: CHAB381_0133
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Entry
CHAB381_0133 CDS
T00577
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cha
Campylobacter hominis
Pathway
cha03410
Base excision repair
cha03430
Mismatch repair
cha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHAB381_0133 (recJ)
03430 Mismatch repair
CHAB381_0133 (recJ)
03440 Homologous recombination
CHAB381_0133 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cha03400
]
CHAB381_0133 (recJ)
DNA repair and recombination proteins [BR:
cha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CHAB381_0133 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CHAB381_0133 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CHAB381_0133 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PGBA_N
Motif
Other DBs
NCBI-ProteinID:
ABS52009
UniProt:
A7HZQ5
LinkDB
All DBs
Position
complement(113975..115549)
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AA seq
524 aa
AA seq
DB search
MVGKKELKEILSARFKNDKHTKISQIPLPSDLKDTYKAANRIKEAINNNEKIAIIGDYDV
DGVVSSVIMNDFLSELGANFIVKIPNRFTDGYGLNPQMLNELDGINLIITVDNGISANDA
AEICYKKRIDLIITDHHMPPPTLPKAYAIINPKQNDCTFPNVEICGAQVAWYLIGALKEI
CNVNYDMSELLDLLIIAIIADMMELRDLNRALLKFGIKKLNNSKRACFKAIREHYFKKKF
EFDDISYTIAPLINSTGRMDDASLSYKFLCSKNIKEANYYLDQITKINRSRKEEEHILYK
QSLQNVDENDHILVTWGENWHEGVIGIVASRLTKNYKKPAIVFSIDKDANRAKGSARSIG
KFDILELIASQKELLEGFGGHKGAAGLVINPQNLSEFKRKINNACFNVNHGNFTFSDEIL
GELNLSELDNEMLKILEFYEPYGQKNPRPLFKLENAIVKNIKIIGKEKNHAKIAIEKNNA
IREGLFFNFNFLPQVGDSFSFIASIGKNSFRGEISPELIIKEIL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggtaggtaaaaaagagttaaaagaaattttatcggctcgctttaaaaatgacaagcat
actaaaatttcgcaaattccacttccaagcgatcttaaagacacttataaagccgcaaat
cgcataaaagaagctataaacaataatgaaaaaatagcgattatcggcgattatgatgtg
gacggcgtcgtaagcagcgtaattatgaatgattttttaagcgagctcggtgcaaatttc
atagttaaaattccgaatcgctttactgatggatacggtcttaatccgcaaatgcttaat
gagcttgacggaataaatcttattatcacggtggataatggaatttcggcaaacgatgca
gctgaaatctgctacaaaaaaagaatagatcttataatcacggatcaccatatgccgccg
ccgactcttccaaaagcttatgcgataataaatcccaaacaaaatgactgcacatttccg
aatgtagaaatttgcggggcacaggtagcgtggtatttaatcggtgctttaaaagaaatt
tgcaatgtaaattatgatatgtcagagctcctggatcttttaataattgctataattgct
gatatgatggaacttcgagatttaaatcgcgcacttttaaaattcggcataaaaaagctt
aacaactcgaagcgcgcctgctttaaagccataagagagcattattttaagaaaaaattt
gagtttgacgacataagttacacaatagctccacttataaactctacaggcagaatggac
gatgcaagtttgtcttataaatttttgtgctcgaaaaatataaaagaagcgaattactat
cttgatcaaattacaaaaataaacagatcgcgcaaagaagaagaacacatcctttataaa
caaagcttgcaaaatgtggatgaaaacgaccatatattagtaacttggggcgaaaattgg
catgaaggcgtaataggaatagttgccagcagacttacaaaaaattataaaaaaccggca
attgtgtttagtatcgataaggacgcaaatcgtgcaaaaggaagcgccagaagcatagga
aagttcgatattttagaacttatagcttcacaaaaagaacttttggaaggttttggcggg
cataaaggcgcggcaggacttgtgataaatccacaaaatttaagtgagtttaaaaggaaa
ataaacaatgcctgcttcaatgtaaatcatggaaattttacattttccgatgaaattttg
ggcgagctcaatttaagcgaacttgataacgaaatgcttaaaattttggaattttacgaa
ccatacggacaaaaaaatccgcgtccgctttttaaattggaaaatgcaattgtaaaaaac
ataaaaatcatcggaaaagagaaaaatcacgctaaaatcgcaatcgaaaaaaataacgca
ataagagaaggactgttttttaatttcaactttttaccacaagttggagatagtttttca
tttatcgcatcaatcggcaaaaattcgtttcgcggagaaatttcacccgaactgattata
aaagaaattttgtga
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