Campylobacter hominis: CHAB381_1707
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Entry
CHAB381_1707 CDS
T00577
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
cha
Campylobacter hominis
Pathway
cha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CHAB381_1707 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cha03400
]
CHAB381_1707 (uvrB)
DNA repair and recombination proteins [BR:
cha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHAB381_1707 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CHAB381_1707 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
Kinesin
Microtub_bd
DUF87
UB2H
Motif
Other DBs
NCBI-ProteinID:
ABS51258
UniProt:
A7I3X8
LinkDB
All DBs
Position
1622462..1624435
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AA seq
657 aa
AA seq
DB search
MKNFEIVSKFSPSKDQQNAIENITASIKNGNKYQTLLGVTGSGKTFTMANIIKNLQMPAL
IMTHNKSLAAQLYSEFKGFFPKNHIEYFISYYDYYQPEAYIPRQDLFIEKDSSINDELER
LRLSATASLLSFDDVVTIASVSANYGLGNPAEYQGMVLFLEINKKFSLKFLLRKLVDMGY
SRNDTYFDRGDFRVNGDIIDIYPAYFNDEAIRLEFFGDELDDMYHFDVIENKKTQNLKKF
ILYPTSQFIVGENRLKEAIKGIENELGERLEFFNDNGKLVEAQRLKQRVDFDLEMLESTG
MCKGIENYARYLTGQNAGETPYSLFDYYEIKGMDYLVIIDESHVSLPQFRGMYAGDRSRK
ETLVEYGFRLPSALDNRPLMFDEFINKRAKFLFVSATPNDYELELSKDHVYYQILRPTGL
LDPEIVLKDSDNQVEILYDMAKEVIADNERVLVTVLTKKMAEELSKYYLELGLKVKYMHS
DIDAIERNELIRGLRTGDFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSRTSLIQT
MGRAARNVNGKVVMFCKKITNSMKEAIEITQKRRKYQDEYNKTHNITPKSVSRNVEESLK
LDDTEAIDRAMKAEKMPSSERAKIVKDLRKQMMEAADKLEFEKAAALRDEIKKMRKL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaattttgaaattgtcagtaaattctcgccaagcaaagatcaacaaaatgcgatt
gaaaatataaccgcatcaataaaaaacggaaataaatatcaaactttattaggtgttacc
ggttcaggcaaaacttttacaatggcaaatattataaaaaatttacaaatgcctgctttg
ataatgacacacaataaatcccttgcagcacagctttacagcgaatttaaaggctttttt
ccaaaaaatcacattgaatattttataagttattatgactattatcagcccgaagcctac
attccgcgtcaggatctttttatagaaaaagacagttctataaatgatgaattggagcgt
cttagactttctgctacggcaagtttgcttagttttgacgatgttgtaacaatagcttcc
gtttcagcgaattacggattaggaaatcctgcagaatatcaaggaatggtactgttttta
gagataaataagaaattcagtcttaaatttctgcttagaaaacttgtggatatgggatac
agcagaaacgacacatattttgatcgcggagattttcgcgtaaacggcgatataatagat
atttatcctgcatattttaacgatgaagcgattagacttgaatttttcggcgatgaactt
gatgatatgtatcatttcgatgtgattgaaaacaaaaaaactcaaaatttaaaaaaattt
atcttatatccgacttcacaatttatagtaggcgaaaatcgtttgaaagaggcgataaaa
gggatagaaaacgaacttggcgaaagacttgaattttttaatgataatggcaaattggtt
gaagcgcaaagattaaagcaaagagtggattttgatcttgaaatgctggaatctacagga
atgtgcaaaggaatcgaaaattatgcaagatatttaacaggtcaaaatgcaggcgaaaca
ccatattcactcttcgattattatgaaatcaaaggaatggattatttggttatcattgat
gaaagccatgtgagtttgccgcaatttcgcggtatgtatgcaggtgatagaagccgcaaa
gaaacacttgttgagtatggtttcagacttccttccgcgcttgataaccgccctttgatg
tttgatgagtttataaataaacgcgccaaatttctttttgtttcggctacaccgaacgat
tacgagcttgaactcagcaaagaccatgtttattaccaaattttacgtcctacaggactt
cttgaccctgagattgttttaaaagacagtgataatcaagtggaaattttatatgatatg
gcaaaagaggttatcgccgataatgaaagagttttagtaaccgtgctgacaaaaaaaatg
gctgaagagcttagtaaatattatctggaacttggccttaaagtaaaatatatgcattcc
gatatcgacgcaattgagcgaaacgagttgattcgaggacttagaaccggagattttgat
atgctgatcggcataaatttacttcgcgaaggtcttgatctgcctgaagtcagtttgatt
gcgataatggacgccgataaagagggttttttaagatcgcgcacgagtcttatccaaaca
atggggcgggctgcaagaaatgtaaatggaaaagtggtaatgttttgcaaaaaaatcaca
aattccatgaaagaagccattgaaataactcaaaaaagaagaaaatatcaagacgaatac
aacaaaacacacaatataacaccgaaatccgtcagcagaaatgtggaggaaagcttaaaa
cttgacgacactgaagcaatcgatagagctatgaaagcggaaaaaatgccttcaagcgaa
cgggcgaaaatcgttaaagatttgcgaaaacagatgatggaagccgccgataaattggaa
tttgaaaaagcggcggctttacgcgacgagattaaaaagatgagaaaattgtaa
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