| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
chad Corynebacterium hadale
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:chad00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHAD_01630 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:chad03021]
CHAD_01630 (rpoC)
03400 DNA repair and recombination proteins [BR:chad03400]
CHAD_01630 (rpoC)
Enzymes [BR:chad01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CHAD_01630 (rpoC)
Transcription machinery [BR:chad03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CHAD_01630 (rpoC)
DNA repair and recombination proteins [BR:chad03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CHAD_01630 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
349824..353822
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| AA seq |
1332 aa
MFDVNLFNELRIGLATAEDIRKWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDMSTLEAEMLLEKKEVEEDANSEIAERAHKLEED
LAELEASGATAAARKKVQQAADKEMTHIREAGEREVERLDDIWQTFQKLAPKQMIIDEVL
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLESEAEELRTIIAEGKGQKKVRALKRLKVVA
AFQRSGNDPAGMILDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGSRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVDNQYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGKPLAMPRLDMVTGLYFLTMLKSTDEIGGE
GAYAPADENGPAQGVYSSYREAIMAYDRGVLGLQAPIKVRIDHLRPTVEVEEEQFPDGWT
KGQAWMTETTLGRIMFNELLPFNFPFQEGAMVRKGGGAGKVLLGDIIQDMVEKYPMITVA
QTLDKMKDAGFYWATRSGVTITMSDVLVLPNKTQFLERYEKEAEEIERKFWEKGALTEEN
RYDRLVELWQDATNKVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSRG
EYITRPIKTSFREGLSVMEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREL
DCGTHQGVKVPVAEAAGDAFVRHDLVETSVSGRVLASDAKDSEGNVVFEAGTELSEERID
VLVQKGVAEVKVRSVLTCQTPTGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIGEPGTQL
TMRTFHQGGVGGDITGGLPRVQELFEARVPKNCAPIASVAGTVSLEDEGNFWTLTIHPDD
DSDDVVYEKLSKRQGLAQVRRPMESNPDAMIERSLREGDHVEVGERLLRGAADPHDVLEV
LGRRGVEKHLIDEVQAVYRTQGVSIHDKHIEIIIRQMLRRGTVIDSGSTEFLPGTLIDLS
EARQVNAATVADEGQPAEMRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDQ
LIGLKENVIIGKLIPAGTGISRYRNIQVKPTEAARSAAYSIPSFGEGIYGDEGYGEYTGA
SVPLDEYGIDQI |
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| NT seq |
3999 nt +upstreamnt +downstreamnt
gtgtttgacgtaaacctcttcaacgagcttcgcatcggcctggccactgcagaagacatt
cgtaagtggtcccacggcgaagtgaagaagccggagaccatcaactaccgcaccctcaag
cccgagaaggacggcctgttctgcgagcgcatcttcggccccacccgcgactgggagtgc
gcctgcggtaagtacaagcgcgtccgttacaagggcatcatctgcgagcgctgcggcgtc
gaggtgaccaagtccaaggtgcgccgcgagcgcatgggccacatcgagctcgccgctccc
gtgacccacatttggtacttcaagggcgtcccgtctcgcctgggttacctgcttgacctc
gctccgaaggacctggagcgcatcatctacttcgccgccaacatcatcaccagcgtcgac
gaggaagcacgtcacaacgacatgtccacccttgaggcggagatgctgctggagaagaag
gaagtcgaggaggacgccaactccgagatcgccgagcgcgcacacaagctggaggaagac
ctcgccgagctcgaggcttccggcgcgaccgccgctgcccgcaagaaggtgcagcaggca
gccgacaaggaaatgacgcacatccgcgaggccggcgagcgcgaggtcgagcgcctcgac
gacatctggcagaccttccagaagctcgccccgaagcagatgattatcgacgaggtgctc
tacgaggagctcgtcgaccgctacgaggactacttcaccggcggcatgggcgctgaggca
atccagacgctgatccgcaacttcgacctcgagtccgaggccgaggagctgcgcaccatc
atcgctgagggcaagggccagaagaaagtccgcgcgctcaagcgcctcaaggtcgtcgct
gcgttccagcgctccggcaacgacccggccggcatgatcctggacgcgatcccggtgatc
ccgccggagctgcgcccgatggtgcagctggacggtggccgcttcgccacctccgacctg
aacgacctgtaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgattgacctc
ggcgcgcccgagatcatcgtgaacaatgagaagcgcatgctgcaggagtccgtggacgcg
ctgtttgacaacggccgccgcggccgtccggtcaccggaccgggctcccgcccgctgaag
tccctgtccgacctgctcaagggcaagcagggccgcttccgccagaacctgctgggtaag
cgcgtcgactactccggtcgttccgtgattatcgtcggcccgcagctcaagctgcacgag
tgcggtctgcccaagctgatggcgctcgagctgttcaagccgttcgtgatgaagcgcctg
gtggacaaccagtacgcgcagaacatcaagagcgcgaagcgcatggtggagcgccagcgc
cccgaggtgtgggacgtgctcgaagaggccatctccgagcacccggtgctgctcaaccgc
gcaccgaccctgcaccgcctgggcatccaggccttcgagccgaagctggtcgagggcaag
gccatccagctgcacccgctggcgtgcgaggcgttcaacgctgacttcgacggcgaccag
atggcagtccacctgccgctgtccgcagaggcgcaggcggaggcccgcgtgctgatgctg
tcctccaacaacatcctgtccccggcgtccggcaagccgctggcaatgccgcgcctggac
atggtgaccggcctgtacttcctcaccatgctgaagtccaccgatgagatcggcggcgag
ggcgcctacgcgcctgccgacgagaacggcccggcacaaggcgtctactcctcctaccgc
gaggcgatcatggcgtacgaccgcggcgtgctcggcctgcaggccccgatcaaggtccgc
atcgaccacctgcgcccgaccgttgaggtcgaggaggagcagttcccggacggctggacc
aagggccaggcatggatgaccgagacgacgctcggccgcatcatgttcaacgagcttctg
ccgttcaacttccccttccaggaaggcgccatggtgcgcaagggcggcggcgccggcaag
gtgctgctgggtgacatcatccaggacatggtggagaagtaccccatgatcaccgtcgcg
cagacgctggacaagatgaaggacgccggcttctactgggcaacccgttccggcgtgacc
atcaccatgtctgacgtgctggtgctcccgaacaagacgcagttcctcgagcgctacgag
aaggaagccgaggagatcgagcgcaagttctgggagaagggtgcgctcaccgaggagaac
cgctacgaccgactggttgagctgtggcaggacgccaccaacaaggtcggccaggccgtg
gaggacctctacccggacgacaacccgattccgatgattgtgaagtccggtgctgccggt
aacatgcgccagatctggaccctggccggcatgaagggcatggtcgtgaactcgcgcggt
gagtacatcacccgcccgatcaagacctccttccgcgagggcctgtccgtgatggagtac
ttcaacaactcccacggttcccgtaagggcctggccgataccgcactgcgtaccgcggac
tccggctacctcacccgtcgtctggtggacgtggcgcaggacgtcattgtccgcgagctg
gactgtggcacccaccagggcgtcaaggtcccggtggcagaggccgctggtgacgccttc
gtccgccatgacctggtggagacctccgtgtccggccgagtcctggcctccgacgcgaag
gactccgagggcaacgtcgtcttcgaggccggcaccgagctgtccgaggagcgtatcgac
gtgctcgtgcagaagggcgtcgccgaggtcaaggtccgctccgtgctgacctgccagacc
ccgactggcgtctgcgccaagtgctacggcaagtccatggcgtccggccagctggtggac
atcggcgaggccgtcggcatcgtcgctgcacagtccattggtgagccgggtacccagctg
accatgcgtaccttccaccagggtggtgtcggcggcgacattaccggtggtctgccgcgt
gtccaggagctgttcgaggcccgcgtgcccaagaactgcgcgccgatcgcgtcggtcgcc
ggtacggtctccctggaggacgagggcaacttctggaccctcaccatccacccggacgac
gactccgacgacgtggtgtacgagaagctgtccaagcgccagggcctggcccaggtgcgc
cgcccgatggagtccaacccggacgccatgatcgagcgctccctgcgcgagggcgaccac
gtcgaggtgggcgagcgcctgctccgcggtgccgcagacccgcacgacgtgctcgaggtc
ctcggccgtcgcggcgtggagaagcacctcatcgacgaggtgcaggccgtgtaccgcacc
cagggtgtgtccatccacgacaagcacatcgagatcatcattcgccagatgctgcgccgc
ggcacggtcatcgactccggctcgaccgagttcctgccgggcacgctgatcgacctctcc
gaggcacgccaggtcaacgccgccaccgtggcggacgagggccagccggcggagatgcgc
tccgagatcatgggtatcaccaaggcctcactagctaccgagtcctggctgtcggccgcc
tccttccaggagacgacccgcgtgctcacggacgccgcgatcaacaagcgctccgaccag
ctcatcggtctgaaggagaacgtgatcatcggtaagctgatcccggccggtacgggcatt
tcccgctaccgcaacatccaggtcaagccgaccgaggccgcgcgctccgcggcgtactcc
atcccgagctttggcgagggcatctacggcgacgagggctacggcgagtacaccggcgcc
tccgtcccgctcgacgagtacggcatcgaccagatctag |
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