Corynebacterium hadale: CHAD_11975
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Entry
CHAD_11975 CDS
T09187
Symbol
nei2
Name
(GenBank) Endonuclease 8 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
chad
Corynebacterium hadale
Pathway
chad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHAD_11975 (nei2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chad03400
]
CHAD_11975 (nei2)
Enzymes [BR:
chad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CHAD_11975 (nei2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CHAD_11975 (nei2)
DNA repair and recombination proteins [BR:
chad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHAD_11975 (nei2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
WKC61230
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All DBs
Position
2562270..2563076
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AA seq
268 aa
AA seq
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MPEGHVIHRLATRLNDDFRGAPIAASSPQGRFEASLIDAHPLLAARAHGKHLFLEFAPAT
VHIHLGLIGSLRFEPVEDVWGQIRLRLVPDRGAGAVAANLRGPQTCAYVNPAEVAAILER
TGEDPLDAGADPDALWARVHRSKRTIGSLMMDQAYFAGVGNIYRAEPLFRLGISPFTPGR
ALDRAEFDALWADLVQLMHYGVEHGRIDTVRDEHAPEAMGREPRKDDHGGEVYVYRRAGQ
PCYVCGDEIALRKVEGRNLFWCPTCQRD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgaaggtcacgtcatccaccgcctggccacgcgcctgaacgacgacttccggggc
gcgcccattgcggcctcctcgccccaggggcgcttcgaggcatcgcttatcgacgcccac
ccgctccttgccgcacgcgcccacggcaagcacctgtttttggagtttgcaccggcgacc
gtgcacatccacctgggcctcatcggctcgctgcgcttcgagcctgtggaggacgtgtgg
ggccagatccggctgcggctcgtgccggatcgcggcgctggcgcggtggcggccaacctg
cgcgggccgcagacctgcgcctacgtcaacccggcggaggttgccgccatcctggagcgc
acgggcgaggacccgctcgacgcgggcgcggacccggacgcgctgtgggcgcgcgtccac
cgctcgaagcgcacgatcggctcgctgatgatggaccaggcctacttcgccggggtgggc
aacatctaccgcgcagaaccgctcttccggctcggtatttccccgttcacgccgggccgc
gcgctggatcgggcagagttcgacgcgctgtgggccgacctggtgcagcttatgcactac
ggggtcgagcacggccgcatcgacacggtgcgcgacgaacacgcgccggaggcgatgggg
cgcgagcctcgcaaggacgaccacggcggcgaggtctacgtgtaccgccgggccggccag
ccctgttacgtgtgcggcgacgagatcgcgctgcgcaaggtggaggggcgcaacctgttc
tggtgccccacctgccagcgcgactag
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