Chromobacterium haemolyticum: CH06BL_01230
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Entry
CH06BL_01230 CDS
T06734
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chae
Chromobacterium haemolyticum
Pathway
chae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CH06BL_01230 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chae03019
]
CH06BL_01230 (recQ)
03400 DNA repair and recombination proteins [BR:
chae03400
]
CH06BL_01230 (recQ)
Enzymes [BR:
chae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CH06BL_01230 (recQ)
Messenger RNA biogenesis [BR:
chae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CH06BL_01230 (recQ)
DNA repair and recombination proteins [BR:
chae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CH06BL_01230 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
SKI
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
BBH10875
LinkDB
All DBs
Position
151041..152846
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AA seq
601 aa
AA seq
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MQDALSLLNNIFGYPEFRGQQGEIVDHVAQGGHALVLMPTGGGKSLCFQIPALMRPGVAI
VVSPLIALMQDQVATLVEQGVAAACLNSATPLDEARDIARQARAGSLDLLYVAPERLLTP
RFQEFVSQLNISLFAIDEAHCVSHWGHDFRPEYQQLGFLAERFPQVPRIALTATADEQTR
ADIIDYLKLQDARVFLSSFDRPNLFYQVVEKHNAKKQLLDFIRNEYPGSAGIVYCLSRKR
VEDTAQWLCDNGIHALPYHAGLSHQQREANQREFLRDEGVVMVATVAFGMGIDKPDVRFV
AHIDMPKSPENFYQESGRAGRDGLPAASWLCYGLNDVVQLRQMIEGGEMAELQKQVELGK
LEAMLAFCEAASCRRQHILAHFGEQSSPCGHCDNCLHPPITFDATVAVQKLLSCIYRVEQ
RFSAGHVIDVLLGRANQSVGHYGHDKLSTFGIGRDYNQRVWRSIVRQLVARKLLHVDIAR
GQSLVLSDECRSVLKGQEKVYLRPVADDKASRSTASADRWLRTEREERLWQALRGWRRQM
ADEHNVPAYAVFSDRTLRDLVEKHPTSRAGLAKVYGLGELKLARYGEALLELLSAAAAEA
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgcgctctccctactcaataatatcttcggctatcccgaattccgcggacag
caaggggagattgtcgatcatgtcgcccagggcggccacgcgctggtgctgatgcccacc
ggcggcggcaaaagcctctgtttccagatccccgcgctgatgcgtccaggcgtcgccatc
gtggtgtccccgctgatcgcgctgatgcaggaccaagtggccactctggtggaacagggc
gtggccgcggcctgcctcaattccgccaccccgctggacgaagcgcgcgacatcgcgcgc
caggcgcgcgccggctcgctggacctcttgtacgtggcgccggagcgtttgctgacgccg
cgcttccaagagttcgtatcgcagctgaacatcagcctgttcgccatcgacgaagcgcat
tgcgtcagccactggggtcatgacttccgtccggaataccagcaattgggtttcctggcc
gaacgtttcccgcaagtgccgcgcattgccctgaccgccaccgccgacgaacaaacccgc
gcggacatcattgattacttgaagctgcaggacgcgcgcgtttttctgtccagcttcgac
cgccccaacttgttctaccaagtggtggaaaagcacaacgccaagaagcaactgcttgat
ttcatccgcaacgaatacccgggcagcgccggcatcgtctattgcctgtcgcgcaagcgc
gtggaagacaccgcgcaatggctgtgcgacaacggcattcacgcgctgccctaccacgcc
ggcctcagccatcagcagcgtgaggcgaatcagcgcgaattcctgcgcgacgagggcgtg
gtcatggtggccaccgttgccttcggcatgggcatagacaagccggacgtgcgcttcgtc
gcccatatcgatatgcccaagagcccggagaacttctatcaggagtccggccgcgccggc
cgcgacggtctgcccgccgccagttggttgtgctatggactcaacgacgtggtgcagctg
cggcaaatgatagagggcggggagatggctgaactgcaaaagcaggtggaattaggcaag
ctcgaagccatgctggccttttgcgaagccgcgtcctgccgccgtcagcacatcctggct
catttcggcgaacagagcagcccttgcggccattgcgacaactgcctgcatccgcccatc
accttcgacgccaccgtggcggtacaaaagctgctgtcctgcatttaccgggtggagcag
cgcttctccgccggccacgtgatcgacgtgctgctgggccgcgccaatcaaagcgttggc
cattacggccacgataagctgtccaccttcggcatcggtcgagattacaaccaacgcgtc
tggcgctccatcgttcgccaactggtggcgcgcaagcttttgcatgtcgacatcgcccgc
ggccaatcgctggtgttgagcgatgaatgccgcagcgtgctcaaaggccaggaaaaagtc
tatctgcggccggtggccgacgacaaagcgtcgcgcagcacagccagcgccgaccgttgg
ctgcgcaccgaacgcgaagaacggttgtggcaggcgctgcgcggctggcgccgacaaatg
gcggacgaacacaatgtgccggcctacgcggtgttctccgaccgcaccttgcgagacctg
gtggaaaagcatccgacctcccgtgccggcctggccaaggtctatgggttgggagaactc
aagctggcgcgctacggcgaggcgctgctcgaattattgagcgcggcggcggccgaggcg
ggctga
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