Chromobacterium haemolyticum: CH06BL_01560
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Entry
CH06BL_01560 CDS
T06734
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
chae
Chromobacterium haemolyticum
Pathway
chae03030
DNA replication
chae03430
Mismatch repair
chae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH06BL_01560 (holA)
03430 Mismatch repair
CH06BL_01560 (holA)
03440 Homologous recombination
CH06BL_01560 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chae03032
]
CH06BL_01560 (holA)
03400 DNA repair and recombination proteins [BR:
chae03400
]
CH06BL_01560 (holA)
Enzymes [BR:
chae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH06BL_01560 (holA)
DNA replication proteins [BR:
chae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CH06BL_01560 (holA)
DNA repair and recombination proteins [BR:
chae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CH06BL_01560 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
BBH10908
LinkDB
All DBs
Position
188263..189267
Genome browser
AA seq
334 aa
AA seq
DB search
MPSLSPDALIAALGKGLAPLYLIHGEEALLALEAADALRQAARDQGYQEREVLTVEAGFD
WSQLRDAMSSVSLFAERKLLEIRIPNGKPGTEGAEALQQLAAQPPQDTVTLITLPKLERA
QQQSKWFQALEKLAVTVEARLVGRAELPSWISRRLKAQGQSLGGEALAFFVDRVEGNLLA
ARQEVDKLALLYPAGELTLEQLRAAVANVARFDVFHLSESWLAGDVPRVLRMLDGLMAEG
EAPVLVLWSLTEDVRMLLRLRQGLKDGRNARDMARELRLWGDKQRLAEPALRRIGPRKLM
TALDECARIDRQIKGVETGDPWQTMRGLAGLLAA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcctaagccctgacgcgctgatcgcggcgctgggcaagggcctggcgccgctg
tacctgatccacggcgaggaagcgctgctggcgctagaggccgccgacgcgctgcgtcag
gcggcgcgcgatcaaggttatcaggagcgtgaagtgctgacggtggaggccggtttcgac
tggtcgcagctgcgcgacgcgatgagcagcgtctcgctgttcgccgagcgcaagctgctg
gaaatccgtattcccaacggcaagcccggcaccgaaggcgccgaggcgctgcaacagctg
gcggcgcagccgccgcaggacacggtgaccctgattaccctgcccaagctggagcgcgcg
cagcagcagtccaagtggttccaggcactggaaaagctggcggtgaccgtggaggcccga
ttggtgggccgcgctgagctgccaagctggatctcgcgccggctcaaggcccagggccag
tcgctgggcggcgaagcgctggccttctttgttgatcgcgtcgaaggcaatttgctggcc
gcgcgccaggaagtggacaagctggccctactgtacccggccggagaattgacgctggag
caactgcgcgccgcggtggcgaatgtggcccgcttcgacgtgttccatttgtccgaatcc
tggctggccggcgatgtgccgcgggtgttgcgcatgttggacggcttgatggccgaaggc
gaggcgccggtgctggtgttgtggtcgctgaccgaagacgtgcgcatgttgctgcgcctg
cggcagggcctgaaggatggacgcaacgcgcgcgacatggcgcgcgaactgcgtttatgg
ggcgacaagcagcgtttggccgagccggccttgcgccgcatcggcccgcgcaagctgatg
accgcgctggatgagtgcgcacgcatagaccgtcagatcaagggcgtggaaaccggcgat
ccttggcagacgatgcgagggttggcgggtttgctagcggcttga
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integrated database retrieval system
