KEGG   Chromobacterium haemolyticum: CH06BL_12950
Entry
CH06BL_12950      CDS       T06734                                 
Name
(GenBank) hypothetical protein
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
chae  Chromobacterium haemolyticum
Pathway
chae03030  DNA replication
chae03430  Mismatch repair
chae03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CH06BL_12950
   03430 Mismatch repair
    CH06BL_12950
   03440 Homologous recombination
    CH06BL_12950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chae03032]
    CH06BL_12950
   03400 DNA repair and recombination proteins [BR:chae03400]
    CH06BL_12950
Enzymes [BR:chae01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CH06BL_12950
DNA replication proteins [BR:chae03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CH06BL_12950
DNA repair and recombination proteins [BR:chae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CH06BL_12950
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNAX_ATPase_lid DNA_pol3_tau_5 AAA RuvB_N AAA_16 AAA_22 AAA_5 AAA_30 AAA_14 ResIII AAA_18 TIP49 nSTAND3 AAA_19 Rad17 Mg_chelatase PIF1 AAA_7 TsaE Herpes_Helicase DUF815 AAA_28 AAA_24 ABC_tran RsgA_GTPase Sigma54_activ_2 SKI DUF3646 NTPase_1 Zeta_toxin Sigma54_activat ORC-CDC6-like VapE-like_dom NPHP3_N
Other DBs
NCBI-ProteinID: BBH12047
LinkDB
Position
1401353..1403227
AA seq 624 aa
MSYQVLARKWRPKRFADLVGQEHVVRALTNALKEQRLHHAYLLTGTRGVGKTTIARILAK
SLNCETGTTAEPCGECSACRQIDTGRFVDLLEIDAASNTGIDNIREVLENAQYAPTSGRF
KVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFSLRNMTP
QQVAGHLAHMLDVEGIAYEAPALALLGRAAAGSMRDAQSLLDQAIAYGLGDVKEDGVRAM
LGAVDRRYLFALLQALAAGDGPQLMAQADSLAERGVSFEGALSELAVLLQQLALMQTVPQ
AIAQDEPERDALQALADAISPQDVQLYYQIAIHGRKDLALAPDEHAGFNMTLLRMLAFHP
ANTQPESAPSRPAAVASTRPQQPPAQSAPAVSGGISPAARALQAAGLSSPAPRQSAPPPA
QESAPAAEPEPEPAAPEARPAPQAAPPAKPEAADDEDDGSDGDVSPDDVPWDQGAAADEE
MPSYLQQEPEEAVDYQFDGDWQALVTELGAKLGAARMLAHNAVLKDWSQDRLALAVPESF
RHMTSRDYQDKLKLALSERFGRPVELAVTVEELGLETPAMKDARHRQEQLNIARENMKND
PVVQQMVREFDATLLIETIQPVKE
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgagctatcaagtccttgcccgtaagtggcgtcccaagcgctttgccgatctggtcggc
caggagcacgtggtgcgcgccttgaccaacgccctcaaagaacagcgtctgcatcacgct
tatctgctgacggggacgcgcggggtgggcaagaccaccatcgcccggattctggccaag
agcctcaattgcgaaaccggcaccaccgcggagccttgcggcgagtgctcggcctgtcgt
cagatcgacaccggccgctttgtcgatttgctggagatcgacgccgcgtccaacaccggc
atcgacaatatccgcgaagtgctggaaaacgctcagtacgcgccgacttccggccgcttc
aaggtctacatcatcgacgaagtgcacatgctgtccaagagcgccttcaatgcgatgctg
aagacgctggaggagccgccggcccacgtcaaattcatcctggccaccaccgatccgcag
aaggtgccggtgacggtgttgagccgctgtctgcagttctcgctgcgcaatatgacgccg
cagcaagtggccggccatctggcccatatgttggatgtggaaggcatcgcctacgaagcg
ccggcgcttgccttgctgggccgcgcggccgccggctccatgcgcgacgcgcagtcgctg
ctggaccaagccatcgcctacggtctgggcgacgtgaaggaagacggcgtgcgcgcgatg
ctgggcgcggtggaccgccgttacctgtttgccttgctgcaggcgttggcggccggcgac
ggcccgcagctgatggcgcaagccgacagcctggccgagcgcggcgtcagctttgaaggc
gcgttgagcgaattggcggtcttgctgcagcagttggcgctgatgcagaccgtgccgcag
gcgatcgcccaggacgagccggaacgcgacgcgttgcaggcgctggcggacgccatctcg
ccgcaggacgtgcagctgtattaccagatcgccattcatggccgcaaagacttggcgctg
gcgccggacgagcacgccggtttcaatatgactctgctgcgcatgctggccttccacccg
gccaacacgcagccggagtccgcgccgtcgcggccagccgccgtcgcgtctacgcggccg
caacagccgccagcgcagtcggccccggccgtgtctggggggatttcgccggccgcgcgc
gctttgcaggccgccggcctgagttcgccggcgccgcgtcagtccgcgccgcccccggca
caggaaagcgccccggcggcggaacccgaacccgagcctgccgcgccggaagccaggccg
gctccgcaggccgcgccgccggccaagccggaagccgcggatgacgaggacgacggtagc
gacggcgacgttagccccgacgatgtgccttgggaccagggcgccgcggcggacgaggag
atgccgtcctatctgcagcaagagccggaggaagcggtcgattatcagtttgacggcgac
tggcaggccttggtgaccgaattgggcgccaagctgggcgcggcgcgcatgctggcccat
aatgcggtattgaaggactggagccaggatcgcctggcgctggcggtgccggagagcttc
cgccacatgaccagccgcgattatcaggacaagctcaagttagcactgagcgaacgcttc
ggccggccggtggaattggccgtgacggtggaggagctgggcctggaaacgccggcgatg
aaagacgctcgccatcggcaggagcagttgaacatcgcgcgcgagaatatgaaaaacgat
ccggtggtgcagcaaatggtgcgcgaattcgacgcgacgctgctcatcgaaaccattcaa
cccgtgaaggagtga

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