Chromobacterium haemolyticum: CH06BL_12950
Help
Entry
CH06BL_12950 CDS
T06734
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
chae
Chromobacterium haemolyticum
Pathway
chae03030
DNA replication
chae03430
Mismatch repair
chae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH06BL_12950
03430 Mismatch repair
CH06BL_12950
03440 Homologous recombination
CH06BL_12950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chae03032
]
CH06BL_12950
03400 DNA repair and recombination proteins [BR:
chae03400
]
CH06BL_12950
Enzymes [BR:
chae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH06BL_12950
DNA replication proteins [BR:
chae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CH06BL_12950
DNA repair and recombination proteins [BR:
chae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CH06BL_12950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_30
AAA_14
ResIII
AAA_18
TIP49
nSTAND3
AAA_19
Rad17
Mg_chelatase
PIF1
AAA_7
TsaE
Herpes_Helicase
DUF815
AAA_28
AAA_24
ABC_tran
RsgA_GTPase
Sigma54_activ_2
SKI
DUF3646
NTPase_1
Zeta_toxin
Sigma54_activat
ORC-CDC6-like
VapE-like_dom
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BBH12047
LinkDB
All DBs
Position
1401353..1403227
Genome browser
AA seq
624 aa
AA seq
DB search
MSYQVLARKWRPKRFADLVGQEHVVRALTNALKEQRLHHAYLLTGTRGVGKTTIARILAK
SLNCETGTTAEPCGECSACRQIDTGRFVDLLEIDAASNTGIDNIREVLENAQYAPTSGRF
KVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFSLRNMTP
QQVAGHLAHMLDVEGIAYEAPALALLGRAAAGSMRDAQSLLDQAIAYGLGDVKEDGVRAM
LGAVDRRYLFALLQALAAGDGPQLMAQADSLAERGVSFEGALSELAVLLQQLALMQTVPQ
AIAQDEPERDALQALADAISPQDVQLYYQIAIHGRKDLALAPDEHAGFNMTLLRMLAFHP
ANTQPESAPSRPAAVASTRPQQPPAQSAPAVSGGISPAARALQAAGLSSPAPRQSAPPPA
QESAPAAEPEPEPAAPEARPAPQAAPPAKPEAADDEDDGSDGDVSPDDVPWDQGAAADEE
MPSYLQQEPEEAVDYQFDGDWQALVTELGAKLGAARMLAHNAVLKDWSQDRLALAVPESF
RHMTSRDYQDKLKLALSERFGRPVELAVTVEELGLETPAMKDARHRQEQLNIARENMKND
PVVQQMVREFDATLLIETIQPVKE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagtccttgcccgtaagtggcgtcccaagcgctttgccgatctggtcggc
caggagcacgtggtgcgcgccttgaccaacgccctcaaagaacagcgtctgcatcacgct
tatctgctgacggggacgcgcggggtgggcaagaccaccatcgcccggattctggccaag
agcctcaattgcgaaaccggcaccaccgcggagccttgcggcgagtgctcggcctgtcgt
cagatcgacaccggccgctttgtcgatttgctggagatcgacgccgcgtccaacaccggc
atcgacaatatccgcgaagtgctggaaaacgctcagtacgcgccgacttccggccgcttc
aaggtctacatcatcgacgaagtgcacatgctgtccaagagcgccttcaatgcgatgctg
aagacgctggaggagccgccggcccacgtcaaattcatcctggccaccaccgatccgcag
aaggtgccggtgacggtgttgagccgctgtctgcagttctcgctgcgcaatatgacgccg
cagcaagtggccggccatctggcccatatgttggatgtggaaggcatcgcctacgaagcg
ccggcgcttgccttgctgggccgcgcggccgccggctccatgcgcgacgcgcagtcgctg
ctggaccaagccatcgcctacggtctgggcgacgtgaaggaagacggcgtgcgcgcgatg
ctgggcgcggtggaccgccgttacctgtttgccttgctgcaggcgttggcggccggcgac
ggcccgcagctgatggcgcaagccgacagcctggccgagcgcggcgtcagctttgaaggc
gcgttgagcgaattggcggtcttgctgcagcagttggcgctgatgcagaccgtgccgcag
gcgatcgcccaggacgagccggaacgcgacgcgttgcaggcgctggcggacgccatctcg
ccgcaggacgtgcagctgtattaccagatcgccattcatggccgcaaagacttggcgctg
gcgccggacgagcacgccggtttcaatatgactctgctgcgcatgctggccttccacccg
gccaacacgcagccggagtccgcgccgtcgcggccagccgccgtcgcgtctacgcggccg
caacagccgccagcgcagtcggccccggccgtgtctggggggatttcgccggccgcgcgc
gctttgcaggccgccggcctgagttcgccggcgccgcgtcagtccgcgccgcccccggca
caggaaagcgccccggcggcggaacccgaacccgagcctgccgcgccggaagccaggccg
gctccgcaggccgcgccgccggccaagccggaagccgcggatgacgaggacgacggtagc
gacggcgacgttagccccgacgatgtgccttgggaccagggcgccgcggcggacgaggag
atgccgtcctatctgcagcaagagccggaggaagcggtcgattatcagtttgacggcgac
tggcaggccttggtgaccgaattgggcgccaagctgggcgcggcgcgcatgctggcccat
aatgcggtattgaaggactggagccaggatcgcctggcgctggcggtgccggagagcttc
cgccacatgaccagccgcgattatcaggacaagctcaagttagcactgagcgaacgcttc
ggccggccggtggaattggccgtgacggtggaggagctgggcctggaaacgccggcgatg
aaagacgctcgccatcggcaggagcagttgaacatcgcgcgcgagaatatgaaaaacgat
ccggtggtgcagcaaatggtgcgcgaattcgacgcgacgctgctcatcgaaaccattcaa
cccgtgaaggagtga
DBGET
integrated database retrieval system