Chromobacterium haemolyticum: CH06BL_13230
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Entry
CH06BL_13230 CDS
T06734
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
chae
Chromobacterium haemolyticum
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chae03016
]
CH06BL_13230 (truB)
Enzymes [BR:
chae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CH06BL_13230 (truB)
Transfer RNA biogenesis [BR:
chae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CH06BL_13230 (truB)
Prokaryotic type
CH06BL_13230 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BBH12075
LinkDB
All DBs
Position
1433274..1434197
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AA seq
307 aa
AA seq
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MSKPRSNRRQIDGVLLIDKPYDISSNGALQKARWLLNAAKAGHTGVLDPLATGLLPVCLG
EATKFSSYLLDADKGYRATVKFGVVTTTGDVEGEVVSERPVAFDREGLLAAMAAFRGEIS
QVPPMYSALKHQGKPLYEYARAGIEIEREARRVNIRRLELISLDGDSAVIEVLCSKGTYI
RTLACDIGEALGCGAHLTGLRRTATGGFSLGEALQLTDIEALDMPQREALLLPADILVRH
LPEAELGADEAGKFMHGQPVRFAEKCAKMQRFRIYREGSREFLGLGEARDDGRLHPIRLL
ASKAATS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccgcgcagcaatcgccgacagatagacggcgtgctgctgatcgacaagccc
tacgacatctccagcaacggcgccttgcaaaaggcgcgctggctgctgaacgccgccaag
gccggccataccggtgtgttggatccgctggccaccggcctgttgccggtgtgcctgggc
gaggcgaccaagttttcttcctatttgctggatgcggacaaggggtatcgcgccacggtg
aagtttggcgtggtcaccaccacgggcgatgtagagggcgaggtagtgtccgagcgcccg
gtggctttcgaccgcgagggcttgctggcggcgatggcggcgttccgaggcgaaatctcc
caggtgccgccgatgtattcggcgctcaagcatcagggcaagcccttgtacgagtatgcg
cgcgccggcattgagattgaacgcgaggcgaggcgggtgaatattcgccggctggagctg
atcagcctggacggcgacagcgctgtgatcgaggtgctgtgcagcaagggcacgtatatc
cgcaccctggcctgcgacatcggcgaagccttgggctgcggcgcgcatttgaccggtttg
cgccgtaccgccaccggcggtttttcgctgggcgaggccttgcagctgactgacattgag
gcgttggacatgccgcagcgggaggctttgctgcttccggcggacatcctggtgcgccat
ctgccggaagctgagttgggcgccgacgaagccggtaaattcatgcacgggcagcccgtg
cgttttgccgaaaaatgtgcgaaaatgcagcgtttccggatttaccgcgagggaagccgg
gaatttctggggctgggcgaggcgcgcgacgatggtcgcctgcatccgatccggctcctg
gcgagcaaggcggcaacgtcttga
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