Chromobacterium haemolyticum: CH06BL_17650
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Entry
CH06BL_17650 CDS
T06734
Symbol
rfaF
Name
(GenBank) lipopolysaccharide heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
chae
Chromobacterium haemolyticum
Pathway
chae00540
Lipopolysaccharide biosynthesis
chae01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CH06BL_17650 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
chae01005
]
CH06BL_17650 (rfaF)
Enzymes [BR:
chae01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
CH06BL_17650 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
chae01005
]
Core region
CH06BL_17650 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Reo_sigmaC_M
Thioredoxin_9
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-ProteinID:
BBH12517
LinkDB
All DBs
Position
complement(1955252..1956289)
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AA seq
345 aa
AA seq
DB search
MKKKILVIGPSWVGDSVMAQPLYQRLHQRHPNLELHVFAPAWTLPLLARMPEVAKAHLNP
FGHGALRLGERWKVARQLAAERFDQAIVLPNSLKSALIPLFAGIPLRTGFLGESRYWILN
DARELDEQALPMMVERFCALAEDKGAPLPRPLSHPRLALTNASQQAALDKLKLDASRPAV
AFCPGAEYGPAKRWPARHFAELARRFDAAGYAVWLFGSGKDREVGDDISRLSGGLAVNLC
GATGLEEAIDLIGLTRLAVCNDSGLMHVAAALDKPLVALYGSSSPDFTPPLSTRAAIVSL
NLDCSPCFERTCPYGHTDCLEKMEPDRVWQAALPLLPVHTQEKTQ
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaaatcctcgtcatcggcccctcttgggtcggcgacagcgtcatggcgcaa
ccgctgtaccaaaggctgcaccaacgccaccccaatctagagttgcacgtattcgcgccg
gcctggaccctgccgctgctggcgcggatgccggaagtggccaaggcccacctcaacccc
ttcggccacggcgccctgcgcctgggcgaacgctggaaggtggcccgccagctggcggcc
gaacgcttcgaccaagccatcgtgctgcccaactcgctgaaatccgccttgatccctctg
ttcgccggcatccccttgcgcaccggcttcctaggcgaatcgcgctactggatcctcaat
gacgcgcgcgaactggacgaacaggcgctgccgatgatggtggagcgcttttgcgcgctg
gccgaagacaagggcgcgccgctgccgcggccgctcagccatcctcggctggcgctgacc
aatgccagccagcaagcggcgctggacaaactgaagctcgacgccagccgccctgcggtc
gccttctgccccggcgccgagtacggcccggccaaacgctggccggcccgacacttcgcc
gagctggcgcgccgcttcgacgccgccggttacgcggtatggttgtttggctccggcaag
gaccgcgaagtgggcgacgacatcagccgcctctccggcggcctggccgtcaacctctgc
ggcgccaccggtctggaagaagcgatagacctgatcggcctgacccggctcgccgtctgc
aacgattctggcctgatgcatgtggcggcggcgctggacaaaccgctggtggcgctgtac
ggctcctccagccccgatttcacgccgccgttgtcgacgcgggccgccatcgtctccctc
aacctggattgcagcccctgtttcgagcggacctgtccgtacggtcataccgattgcctg
gaaaaaatggagccggatcgggtctggcaagccgcgcttccgctgctgcccgtccacacc
caagaaaaaacacaataa
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