KEGG   Chromobacterium haemolyticum: CH06BL_18980
Entry
CH06BL_18980      CDS       T06734                                 
Symbol
rnc
Name
(GenBank) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
chae  Chromobacterium haemolyticum
Pathway
chae03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:chae00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CH06BL_18980 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chae03019]
    CH06BL_18980 (rnc)
   03009 Ribosome biogenesis [BR:chae03009]
    CH06BL_18980 (rnc)
   03036 Chromosome and associated proteins [BR:chae03036]
    CH06BL_18980 (rnc)
Enzymes [BR:chae01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     CH06BL_18980 (rnc)
Messenger RNA biogenesis [BR:chae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CH06BL_18980 (rnc)
Ribosome biogenesis [BR:chae03009]
 Eukaryotic type
  90S particles
   RNase
    CH06BL_18980 (rnc)
 Prokaryotic type
  rRNA processing factors
   CH06BL_18980 (rnc)
Chromosome and associated proteins [BR:chae03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     CH06BL_18980 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_DCL2
Other DBs
NCBI-ProteinID: BBH12650
LinkDB
Position
2117718..2118428
AA seq 236 aa
MIPTDNRFRRLCQALDYAFQKPELLRQALTHRSYGAGNNERFEFVGDSILNYTVARMLFD
QFPKLTEGELSRLRANLVNQNTLAEIAHELKLGDYLYLGEGELKSGGFNRPSILADALEA
TFAAVSFDSDFLRAEQVVRRLYAERVSSIDTTRQAKDAKTRLQEALQARKLALPKYRILL
QSGEAHEQWFRVECDLGELAIGSTGEGGSRRAAEQQAAEAALILLEQKLAASKKRI
NT seq 711 nt   +upstreamnt  +downstreamnt
gtgataccaaccgacaatagattccggcgcctgtgtcaggcgctggattacgcatttcag
aagccggagttgctgcgtcaagccttgacgcaccgcagctacggcgccggcaacaacgag
cgttttgaattcgtgggcgacagcatcctcaactacacggtcgcccgcatgctgtttgat
caatttcccaaactgaccgagggcgagctgtcgcggctgcgcgccaatctggtcaaccag
aacaccctggccgagatcgcccacgagctcaagctgggcgattacctctacttgggcgag
ggcgagctgaagagcggcggtttcaaccggccatccattctcgccgacgcgctggaagcc
accttcgccgcggtcagcttcgactccgatttcctgcgcgcggagcaggttgtgcgccgg
ctctacgctgaacgcgtatcgtccatcgacaccacccgtcaggccaaggacgccaagacc
cgcttgcaggaagcgctgcaggcgcgcaagctggccttgcccaaataccggatactgttg
caaagcggcgaagcccatgagcaatggtttcgcgtggagtgcgacttgggcgaactggcg
ataggctccacaggcgaaggcggcagccgccgcgccgccgaacagcaggccgccgaagcg
gcgctgatcctgctggaacaaaaactcgctgcgagtaagaaacgtatatga

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