Chromobacterium haemolyticum: CH06BL_20060
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Entry
CH06BL_20060 CDS
T06734
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
chae
Chromobacterium haemolyticum
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chae03032
]
CH06BL_20060 (hupB)
03036 Chromosome and associated proteins [BR:
chae03036
]
CH06BL_20060 (hupB)
03400 DNA repair and recombination proteins [BR:
chae03400
]
CH06BL_20060 (hupB)
DNA replication proteins [BR:
chae03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CH06BL_20060 (hupB)
Chromosome and associated proteins [BR:
chae03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CH06BL_20060 (hupB)
DNA repair and recombination proteins [BR:
chae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CH06BL_20060 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
UBA_HYPK
Lmo2446-like_N
Myb_DNA-bind_8
Motif
Other DBs
NCBI-ProteinID:
BBH12758
LinkDB
All DBs
Position
2220600..2220869
Genome browser
AA seq
89 aa
AA seq
DB search
MNKSELIDAIAAEADISKAAAAKALDGMVAAVTDALKKGDTVTLVGFGTFYVGERAERSG
RNPKTGATIKIPAARSPKFRAGKALKDAL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctgaactgattgacgctattgccgctgaggccgatatctccaaagccgcc
gccgccaaggcgctggacggcatggtggccgctgtaaccgacgctctgaaaaagggcgac
accgtgaccctggtgggcttcggcaccttctatgttggcgaacgcgctgaacgcagcggc
cgcaacccgaagaccggcgctaccatcaagatcccggcagctcgttcgccgaagttccgt
gctggcaaggcactgaaagacgcgctataa
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