Chromobacterium haemolyticum: CH06BL_20470
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Entry
CH06BL_20470 CDS
T06734
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
chae
Chromobacterium haemolyticum
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chae03400
]
CH06BL_20470 (sbcD)
DNA repair and recombination proteins [BR:
chae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CH06BL_20470 (sbcD)
Archaeal homologous recombinant proteins
CH06BL_20470 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BBH12799
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All DBs
Position
2268539..2269759
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AA seq
406 aa
AA seq
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MRILHTSDWHLGQHFIGKTRLAEHQTFIHWLLEQAESHQADAVLVAGDIFDTGAPPSYAR
ELYNGLIAQAHRAGVQLVLLGGNHDSVATLAESRALLSYLSACVVPALSEDPAEQVLILK
RRDGEPGALLCALPYIRPRDVLRSQAGQSAEQKQQSLQDAIRERYQQVYEQALRLRERLG
RPLPIIASGHLTTVGASASESVREIYVGALEAFPSNAFPPADYIALGHIHRPQKVGGHEH
IHYSGSPIPLSFDEAGQGKEVLLVELDAQGLRGVTPLEVPCFQPLHSVRGSLAQLPALLA
EAAEAGSAERPVWLEVVVSADDYLSDLAARAQAMCAELPLELLRVRRERGQSASGLVSTA
GETLAELTPLDVFERRLALETLEPPLQEQLRLRYREILASLQEEQA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctccacacctcggactggcacctgggccagcatttcatcggcaaaacccgc
ctggcggagcatcagaccttcattcattggctgctggagcaggcggaaagccaccaggcc
gacgccgtgctggtggccggagacattttcgacaccggcgcgccgcccagctacgcgcgc
gaactgtacaacggcctgatcgcccaggctcaccgtgccggcgtgcaactggtgctgttg
ggcggcaaccacgactccgtggccacgctggcggaaagccgcgcgctgctgtcctatctg
tccgcttgcgtggtgccggccctgagcgaagaccctgcagaacaagtgttgatcctcaaa
cgccgagacggcgaaccgggcgcgttgctgtgcgcgctgccctatatccgcccgcgcgac
gtgttgcgcagccaggcgggccagagcgcggagcaaaagcagcaatccttgcaggacgcc
atccgagaacgctaccagcaggtgtacgagcaggcgctccgcctgcgcgagcggctgggc
cggccgctacccattattgccagcggccatctgaccacggtgggcgccagcgccagcgaa
tccgttcgcgagatctacgttggcgcgctggaggccttccccagcaacgccttcccgccg
gccgactacatcgccctcggccatatccaccggccgcagaaagtgggcggccacgaacac
attcattacagcggctcccccatcccgctgagtttcgacgaagccggccagggcaaggag
gtgctcttggtggagctggacgcccagggcttgcgcggcgtcacgccgctggaggtgcct
tgcttccaacccttgcactcggtgcgcggcagcctggcccagctgccggcgttgttggcc
gaggcggctgaagccggctccgccgaacggccggtgtggctggaagtcgtggtcagcgcc
gacgactacctgagcgatctggccgcccgcgcgcaggcgatgtgcgcggaactgccgctg
gagctgttgcgcgtgcggcgcgagcgcgggcagtccgcctcagggctagtctcgaccgcc
ggcgaaaccctggcagagctgacgccgctggacgtgttcgagcgccggctggcgctggaa
acgctggagccgccgttacaggagcaattgcgcttgcgctaccgcgaaatcctggcctcg
ctgcaggaggaacaggcatga
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