Chromobacterium haemolyticum: CH06BL_20960
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Entry
CH06BL_20960 CDS
T06734
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
chae
Chromobacterium haemolyticum
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chae03000
]
CH06BL_20960
Transcription factors [BR:
chae03000
]
Prokaryotic type
Helix-turn-helix
Other families
CH06BL_20960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_lid_14
AAA_5
AAA_2
HTH_30
Mg_chelatase
AAA
HTH_23
HTH_1
GAF_2
AAA_16
HTH_29
nSTAND3
HTH_28
MCM
HTH_IclR
HTH_22
IclR_C
HTH_7
AAA_3
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
BBH12848
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Position
2337460..2339271
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AA seq
603 aa
AA seq
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MDHPIALPVERARRSFFQQGLAPAGLRGEIAQSWQRCRQQALPPQAARQEDGLEGAALNA
LREANGLLLRLAQPELDGLGEQVIDRRGIVLLSDADGVILNAAGCPGFLPKAEQVALLPG
MAWGERERGTNAIGTALALGAAVQVNGGEHYLASNGGISCSAAPIFAPNGRLAGALNISS
DARAHDAHALGLVRLAARQIEHRWLARSASEHWLVRFHLNHALLGSPREGVLVFADEVLV
EANSCALAWLGLVWADLGRVRFGQLFDGELEPADGLRTRLSRRGQHFHLRITPPARKALA
ECQTPKTEAAARPSAELQRAVKVLNADIPVLLLGETGVGKEVFARALHAASRRGRGPFVA
VNCAAIPEALIESELFGYEEGAFTGARRKGMAGKLREASGGVLFLDEVGDMPAAMQARLL
RALQQREVTPLGGGQTHAVDFALICATHRDLAAMTASGEFRADLFYRLQDYPVRLPPLRE
RGDLPRLIDEMWDELGAEQRGVRLGGPLRAALQACSWPGNARQLHSALRTMLALADDGAE
LGIEDLPAGCRAEAATLSPTLAAGRDDLIEQTLARCQGNVSRAAAELGVARSTVYRRLRG
GGR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcccatcgctttgcccgtggaacgggctcgccgcagtttcttccagcaagga
ctggcgccggcggggctcaggggcgaaatcgcccagtcctggcagcgttgccggcaacaa
gctttgccgccgcaggccgcgcggcaagaggacggcctggagggcgcggcgctgaacgcg
ctgcgcgaggccaacgggctgctgctgcggctggctcagcccgagctggacgggctgggg
gagcaagtcatcgaccgccgcggcatcgtgctgctcagcgatgccgacggcgtgattctc
aacgccgccggctgccccggctttttgcccaaggcggaacaggtggccttgttgcccggc
atggcctggggcgagcgggagcgaggcaccaacgccatcggcaccgctctggccttgggc
gcggcggtgcaggtgaacggcggggaacactatctggccagcaatggtgggatttcctgc
tcggccgcgcccattttcgcgcccaacggccgcctggccggcgcgctgaacatcagcagc
gacgcgcgcgcccatgacgcgcacgcgctgggcctggtgaggctggccgcgcgccagatt
gaacaccgctggctggcccgatcggcctccgagcattggctggtgcgcttccatttgaac
cacgctttgctggggtcgccgcgcgaaggcgtgctggttttcgccgatgaggtgctggtg
gaagccaacagctgcgcgctggcctggctgggcctggtttgggcggacctgggccgggtg
cgcttcggccagctgttcgacggcgagctggaaccggccgacggcttgcggacgcggctt
agccggcgcggccagcattttcatctgcgtatcacgcctccggcgcgcaaggccttggcc
gaatgtcaaacgcccaagaccgaggcggcggcgcggccctctgccgagttgcagcgcgcc
gtcaaagtgctgaacgccgacatcccggtattgctgctgggcgaaaccggtgtgggcaag
gaggtgttcgctcgcgctttgcacgccgccagccggcgcggccgcggccccttcgtcgcc
gtcaactgcgcggcgatccccgaggcgctgatcgaatcggagctgtttggctacgaggag
ggcgccttcaccggcgcgaggcgcaagggcatggcgggcaagctgcgcgaagccagcggc
ggcgtgttgttcctggatgaggtgggggatatgccggcggcgatgcaggcgcgcttgctg
cgcgccttgcagcagcgcgaagtcacgcccttggggggaggtcaaacgcatgcggtggac
ttcgcgctgatttgcgccacccatcgcgacctggcggcgatgacggcgtccggcgagttc
cgcgccgatctgttctaccgcttgcaggactacccggtacggctgccgcccttgcgcgag
cgcggcgacctgccgcgcctgatcgacgagatgtgggacgaactgggcgcggaacaacgc
ggcgtgcgcttgggcgggccgctgcgcgcggctttgcaggcctgcagctggccgggaaac
gcgcgccagctgcacagcgcgctgcgcaccatgctggccctggccgacgacggcgcggaa
ctgggaatcgaggacctgccggccggctgccgcgccgaagcggccaccctctctccgacg
ctggccgccggccgcgacgatttgatcgagcagacgctggcgcgctgtcagggcaatgtc
agccgcgcggcggcggagctgggggtggcgcgcagcacggtgtaccggcggctgcgcggc
ggagggcgctag
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