Chromobacterium haemolyticum: CH06BL_29460
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Entry
CH06BL_29460 CDS
T06734
Symbol
alkA
Name
(GenBank) 3-methyladenine DNA glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
chae
Chromobacterium haemolyticum
Pathway
chae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CH06BL_29460 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chae03400
]
CH06BL_29460 (alkA)
Enzymes [BR:
chae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CH06BL_29460 (alkA)
DNA repair and recombination proteins [BR:
chae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CH06BL_29460 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
BBH13698
LinkDB
All DBs
Position
complement(3248346..3249263)
Genome browser
AA seq
305 aa
AA seq
DB search
MAEPADFVSLSLSLSLPADFRRDDFMAFHRRDAQELSERVTALSLSKGLLWRGAPACLSM
DFAADAVRVELDADVSPQAGDAAALTSMARRMLGLAQPVADFECAHRGHPQLAGLIAARP
GLRVPQTTTPFEALVWAVTGQQISVHAAISLRRRLMQLVGNRHSGGLLCHPSPQQVAELE
PDQLGQAGFSRAKTRTLLELSRQTVDGGLPLQGWLDDGAPEEIAARLLAMPGIGPWTVSY
ALLRGYGWLDGSLHGDVAVRRGLQRLLGRAEAVSPRETEQWLQGFAPWRALVGAHLWAMQ
TAAGY
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccggccgatttcgtttcgctgtctttatccctgtctttgcccgcggatttt
cgccgggacgacttcatggccttccaccgccgcgacgcgcaggagctatccgagcgggtg
acggcgctgagcctgagcaagggcttgctgtggcgcggcgcgccggcctgccttagcatg
gatttcgctgcggacgcggtgcgggtggagctggacgcggacgtttcgccgcaggccggc
gacgcggcagccttgacctccatggcgcgccgcatgctgggcttggcgcagccggtggcg
gatttcgagtgcgcgcatcgcggccatccccagctggcggggctgatcgccgcgcgtccc
ggtttgcgcgtgccgcagacgaccaccccgtttgaggcgctggtttgggcggtcacgggc
cagcagatcagcgtgcatgccgcgatttcgctgcggcgcaggctgatgcagttggtcggc
aaccgtcacagcggcggcctgctatgccatccgtcgccgcagcaggtggcggagctggag
ccggatcaattggggcaggccggcttctctcgcgccaaaacccggaccttgctggaactg
agccggcagacggtcgacggcggcctgcccttgcaaggctggctggacgacggcgcgccg
gaggagatcgccgcgcggctgctggccatgcccggcatcggcccgtggacggtcagctac
gcgctgctgcgcggctatggctggctggacggctcgctgcacggggacgtggcggtgcgg
cgaggcctgcagcgtctgctggggagggccgaggcggtgtcgccgcgcgaaacagagcag
tggctgcaaggcttcgcgccgtggcgcgcgctggtgggggcgcatctgtgggcgatgcag
acggcggccggctattaa
DBGET
integrated database retrieval system
