Chromobacterium haemolyticum: CH06BL_32650
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Entry
CH06BL_32650 CDS
T06734
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chae
Chromobacterium haemolyticum
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chae03009
]
CH06BL_32650 (rimO)
Enzymes [BR:
chae01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CH06BL_32650 (rimO)
Ribosome biogenesis [BR:
chae03009
]
Prokaryotic type
ribosomal protein modification factors
CH06BL_32650 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
TAZ1_RBM
Motif
Other DBs
NCBI-ProteinID:
BBH14017
LinkDB
All DBs
Position
complement(3593675..3595000)
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AA seq
441 aa
AA seq
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MADKIPSIGFVSLGCPKASSDSEQILTRLRAEGYDISGSYAGADLVVVNTCGFIDSAVAE
SLDAIGEALNENGKVIVTGCLGAKGDVVRDAHPSVLAVTGPHATDEVMSAVHAHLPKPHD
PFVDLVPDIGVRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLESRPIHDVLREAESLAK
AGVKEILVISQDTSAYGVDTKYKLGFHNGRPVKTRMTELCEELGRHGIWVRLHYVYPYPH
VDEVIPLMRDGKILPYLDIPFQHASQKVLKLMKRPANSDNVLARIKKWREICPELVIRST
FIVGFPGETEEDFEELLAFIREAELDRVGCFTYSPVEGATANDLPNPVPEEVKEARKERF
MAVQEEISARRLERRVGQTMQVLVDEIDDEGTAICRSYADAPEIDGLVFVEDAADMRVGE
FYSVKIVDCSEHDLWGERLQS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagattccaagtatcggcttcgtgtcgctgggttgtcccaaagcctctagt
gactccgagcagatcctgacccgccttcgcgccgaaggctacgatatttccggcagttac
gccggcgccgacctggtggtggtcaacacctgtggtttcattgattccgccgtggcggag
tccctggatgcgatcggcgaagccttgaacgagaacggcaaggtcatcgtcaccggctgt
ctgggggccaagggcgatgtggtgcgggatgcgcatccgtcggtcttggccgtgaccggc
ccgcacgccaccgacgaggtgatgagcgcggtacatgcccatctgcccaagccgcatgat
cccttcgtcgatctggtgccggacattggcgtgcggctgacgcccaagcattacgcgtat
ctgaagatttccgaaggctgcaatcatcgttgcaccttctgcatcattccgtccatgcgc
ggggatttggaaagccggccgattcacgatgtgctgcgcgaagcggagagcctggccaag
gccggggtcaaggaaatcctggtgatctcgcaggacacgtcggcttacggggtggatacc
aagtacaagctgggcttccacaatggccgtccggtgaagacccgaatgaccgagctgtgc
gaggagctgggccgccacggcatctgggtgcgtctgcactacgtctatccgtatccgcat
gtggacgaggtgattccactgatgcgcgacggtaagatcctgccctatctggacatcccg
ttccagcacgctagccagaaggtgctgaagctgatgaagcgtccggccaacagcgataat
gtgctggcgcgcatcaagaagtggcgcgagatctgcccggaattggtgattcgctccacc
ttcatcgtaggcttccccggcgagaccgaggaggacttcgaagagctgctggccttcatc
cgcgaggcggagctggaccgcgtaggctgtttcacctattcgccggtggaaggcgccacc
gccaacgatttgccgaacccggtaccggaagaggtgaaggaagcgcgcaaagagcgcttc
atggcggtgcaggaagagatcagcgcacgtcgcctagagcgccgcgtcggtcagacgatg
caggtattggtggacgagatcgacgacgaaggcacggcgatttgccgcagctacgcggat
gcgccggagatcgacggtctggtgttcgtcgaggatgccgcggacatgcgagtgggcgag
ttctattcagtgaagatcgtcgattgcagcgagcacgatttgtggggcgagcgcttacag
tcctaa
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