Chromobacterium haemolyticum: CH06BL_35150
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Entry
CH06BL_35150 CDS
T06734
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
chae
Chromobacterium haemolyticum
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chae01011
]
CH06BL_35150
Enzymes [BR:
chae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CH06BL_35150
Peptidoglycan biosynthesis and degradation proteins [BR:
chae01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CH06BL_35150
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
NMB0315_dom_I
LysM3_NFP
LysM_OapA
SLT_2
Motif
Other DBs
NCBI-ProteinID:
BBH14267
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All DBs
Position
3887999..3889819
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AA seq
606 aa
AA seq
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MNRFTPLALSLSFVFLFASAAHADGAFRQSVGVDEGLAAGLDMMLLNSSLLRNGDNVWER
AREGFQLPEVNAEIVRRQERFYASKPEYFRRTLDRSRKYLFHIMNEVERRGMPTELALLP
LVESAFVPTAKSHVGASGLWQFMPATGRHYGLEQTWWYDGRRDVVEATRAALDYLENLYG
QFGDWNIALAAYNWGEGNVSRAIARLQASGQEVTYENIRMPNETRNYAPKLLAVRNILND
PAKFGVRLDKFPNKPYFVAVSTGKHMNIDIAAKLAGMSISEFKELNPAFNLPVYAHKNGR
QMLIPAAKADKFQANLAKWDKPLLTWEVYTPPADANVSLIASEHGMSAGQLMSANNLSST
SLKAGQPVLVAMSKDQRDIRPLDATDTALPESGDSATLLAQAETPPRAAPAVMVASAQAV
QPSTPVAQAQAPQASAQPTPALAAAPETTPTQAKAVLVATAPPATAAAVADADGNYTVAA
GDTLYSIARRFNLGLDDLKAANQLDSNTVLVGQVLNVNKTMDKSVTLLADNRASQAQQDG
LLKVSSLQINQRATGSVPAEYVVQRGDTLFSIARRFGVNHNDIQRWNDSRQLTRLQPGQK
VRIQGL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcttcaccccgttggcactttcgctgtcatttgtttttttatttgcctccgcc
gcgcacgcggatggggcgtttcgccaatccgtcggcgtggacgagggcctggccgccggc
ctggacatgatgctgctgaactccagcctgcttcgcaacggcgacaacgtttgggaacgc
gcgcgcgaaggcttccaactgccggaagtgaacgcggagatcgtgcgccgccaggaacgc
ttttatgccagcaagccggaatacttccgccgcacgctggaccgcagtagaaaatatctg
tttcacatcatgaacgaagtggagcgccgcggcatgcccaccgagctggcgctgttgccg
ctggtggaaagcgccttcgttcccaccgcgaaatcccatgtcggcgcctccggcctgtgg
cagttcatgccggccaccggtcgccactacggactggaacagacttggtggtacgacggc
cgccgcgacgtggtggaagccacccgcgcagcgctggactatctggaaaacctgtatgga
cagttcggcgactggaacatcgcgctggccgcctacaactggggcgagggcaacgtctcc
cgcgccatcgcccggctgcaggccagcggccaggaagtgacttacgaaaatatccgcatg
cccaacgaaacgcgcaactacgcgcccaagttgctggcggtgcgcaacatcctcaacgat
ccggccaagttcggcgtgcgcctggacaaattccccaacaagccttacttcgttgcggtt
tccaccggcaagcacatgaacatcgacatcgccgccaagctggccggcatgtccatcagc
gaattcaaagaactgaatccagccttcaacctgccggtatacgcgcacaaaaacggccgt
cagatgctgatcccggctgccaaggccgacaagttccaggccaacctggccaagtgggac
aagccactgctcacctgggaagtctacactccgcccgcggacgccaacgtcagcctgatc
gccagcgagcacggcatgagcgccggccagttgatgagcgcgaacaatctgagcagcacc
tcgctcaaggccggtcaaccggtgctggtggcgatgagcaaggatcagcgcgacatccgt
ccgctggacgccaccgataccgccttgccggaaagcggcgacagcgccaccctgttggcg
caggcggaaacgccgccgcgcgcggcgccggcggtgatggtcgcctcggcccaagccgtc
cagccaagcacaccggttgcgcaggcccaggcgccgcaagcgagcgcccagcccactccc
gccctggccgccgcgccggaaacgacgccgacgcaggcaaaagccgtcctcgtagcgacg
gcgcccccggcaacggctgctgccgtggcggacgccgacggcaattacaccgtggccgca
ggcgacaccctgtacagcatcgcccgtcgcttcaacctcggcctggacgatttgaaagcg
gccaaccagctggactccaacaccgttctggtgggccaggtgttgaacgtcaacaagacc
atggacaagagcgtaacgctgctggcggacaaccgagccagccaggcgcagcaagacggc
ttgctcaaagtcagcagcctgcagatcaaccagcgcgccactggcagcgtgccggccgaa
tacgtggtgcagcgcggcgacaccctgttcagcatcgcccgccgctttggcgtcaaccac
aacgatatccagcgctggaacgattcccgccagttgacccggctgcaaccaggtcagaaa
gtgcgcattcagggcttataa
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