Chromobacterium haemolyticum: CH06BL_40080
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Entry
CH06BL_40080 CDS
T06734
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
chae
Chromobacterium haemolyticum
Pathway
chae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CH06BL_40080 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chae03400
]
CH06BL_40080 (recB)
Enzymes [BR:
chae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CH06BL_40080 (recB)
DNA repair and recombination proteins [BR:
chae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CH06BL_40080 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_22
AAA_11
ResIII
Biotin_carb_C
Terminase_6N
OAM_dimer
DUF6668
Motif
Other DBs
NCBI-ProteinID:
BBH14760
LinkDB
All DBs
Position
complement(4404420..4408010)
Genome browser
AA seq
1196 aa
AA seq
DB search
MSLLPQALDALNCPLTGINLIEASAGTGKTWTIAALFARLLLEERDGQPPPTVDQVLVVT
YTKAATAELRERLRRRLSELAQTLAGEGELGGDPFLSALAARFPPGSAREQALQRLNAAI
TGFDAAAIYTIHGFCQRVLTDAAFESSQTFDAELVSDDEDRLIEIVDDFWRRRVVDDPLL
AQVLVDNGETPDGWLADIRPYLSKPYLRMRAPHTAGLERALLAVEQGWRALAARPEYAAE
AADLLRSAAGFNARSYSPAIIERAIGALDGLLATPETTPVLDKESRRQLDKLLSASLAKG
VKKGHAAPEHPLFGLAEAWLGAWDAYLDEVALSVAQLKLELIAWTNEQLSARRASERSRS
FDDLLTDLGAALADPISGPLLAAHVARSFQVALIDEFQDTDPIQYSIFRHCFVAQQRPVF
LVGDPKQAIYSFRGADIFAYLAARGDAQHHYTLDTNRRSEAPLVSTVNALFARELPFLIE
GIAYQPVAAQPASGGRLEIDDDRPPFCFQWLQPEKADKAASGENAAELAANASADEIARL
LALAADSRAAIVAGDARRPLAGGDIAVLVSTHRQGDRVRQALAERGVASVALTQESVFAS
REAGEMLALLRAWAEPASEARLRAALVTELAGVDAGELLARVEDETRWEAQLQANAADHL
LWRERGFMAAWRHFFARERVAERLLPLPDGERRLTNLSHLAELLQQESDQRQGMAPLLGW
LETRVAQPPGGEEAVLRLESDAALVKIVTIHTAKGLQYPVAFCPFLWGGALERRDAAFWR
YHAEDQSWLAPDAAADAGVKLAARSELLAEKLRLLYVALTRAQYRQYLCWGWVRGMETAA
LSWLLHGRDARALPELETLELDAEVLRRELGAFAAAANAQAAGACAVLEESGVGPALAAR
REAGRNYLAQTFTRRLAAPWRVASFTSLTHAQAAGKWQESPDHDAGQPAAAELQAPPVLD
RFGFPRGAKAGTCLHEIFETISFGVDAAGLRQAVELALAKHGFAPEWGDAACEMVTATLN
AELDPGVKLVEVPDGKRLVEMEFMLPAPRLEVAKLAAILSAPEHGLAAPLRAAAAQLDFS
TVRGFLKGFMDLVFESDGRIYLVDYKSNHLGGRHEDYRAERLAESIAQEHYYLQYLIYCV
ALRRYFSVRGVDFAARFGGVRYLYLRGVGVEACGIWSDQPAPALLEALDQWFAGHA
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcttccccaagcgctggatgcgctgaactgcccgctgaccggcatcaacctg
atcgaggcttcggccggtaccggcaagacgtggaccatcgcggccctgttcgcccggcta
ttgctggaagagcgcgacggccagccgccgcccactgtcgatcaagtgttggtggtcacc
tataccaaggcagccaccgccgagctgcgcgagcgcctgcgccgacggctgagcgagctg
gcccagacgctggcgggagaaggcgagcttggcggagatcccttcctgtcggcgctggcg
gcgcgctttccgcccggctcggcgcgggagcaggcgttgcagcggcttaacgccgcgatc
accggcttcgacgccgccgccatctacaccatccacggcttctgccagcgggtgctgacc
gacgccgcttttgaaagcagccagaccttcgacgccgaactggtcagcgacgacgaggat
cgcctgatcgaaatcgtcgacgatttttggcgtcgacgggtggtggacgaccccttgctt
gcccaagtgctggtggacaacggggagaccccggacggttggttggccgacatccggccc
tatctgtccaaaccttatctgcgcatgcgcgcgccccacaccgccggcctggagcgcgcc
ttgctcgcggtggagcaaggctggcgggcgctggcggcgcggccggaatacgcggcggag
gcggccgatttgctgcgctccgccgccggtttcaacgcgcgcagctacagccccgccatc
atcgagcgcgccatcggcgctttggacggcctgctggcgacgccggaaaccacgccggtg
ctggacaaggaaagccgtcgccagctcgacaagctgctgtcggcctcgctggccaagggg
gtgaagaaaggccacgctgcgccggaacatcccttgttcgggctggcggaggcctggcta
ggggcctgggacgcctatctggacgaagtggcgctgtccgtggcccagctcaagttggaa
ctgatcgcctggaccaacgagcaactgagcgcgcgccgggcgagcgagcgcagccgcagc
ttcgacgatttgctgaccgacctgggggcggcgctggccgatccgatcagcggcccgctg
ctggcggctcacgtggcccgcagctttcaggtggcgctgatcgacgagtttcaggacacg
gaccccatccagtactcgatcttccgacattgctttgtagcgcagcagcggccggttttt
ctggtgggcgacccgaaacaggccatctacagctttcgcggcgcagacatcttcgcctat
ctggcggcgcgcggagacgcgcaacatcattacacgctggacaccaaccgccggtccgag
gcgccgctggtgagcaccgtcaacgccttgttcgcgcgcgagctgccgtttctgatcgaa
ggcatcgcctatcagccggtggcggcgcaaccggcttccggcggccggctggagatcgac
gacgacaggccgccgttctgcttccaatggctgcagccggagaaggcggacaaggccgcc
agcggcgagaacgccgccgaactggcggccaacgccagcgccgacgagatcgcgcgcttg
ctggcgctggccgccgacagccgcgccgccatcgtcgccggcgacgcccgacggcctttg
gccggcggcgatatcgcggtgctggtgtccacccaccgtcagggcgaccgggtgcgccag
gccttggcggagcgcggcgtggccagcgtggcgctgacccaggaaagcgtgttcgccagc
cgcgaggccggcgagatgctggccttgctgcgcgcttgggcggagccggccagcgaggcg
cgtctgcgcgcggcgctggtgacggaactggccggggtcgacgccggcgaattgctggcc
agggtggaggacgagacgcgctgggaagcgcaactgcaggccaacgccgcagaccacctg
ctttggcgcgagcgcggattcatggcggcctggcggcatttcttcgctcgtgaacgggtg
gcggaacgcttgttgccgctgccggacggtgagcgacgtttgaccaatttgtcacacctg
gctgaattgttgcaacaagagagcgaccagcgtcagggcatggcgccgctgctgggctgg
ctggagacgcgagtggcgcagccgccgggcggagaggaggcggtgttgaggttggagagc
gacgcggccctggtcaagatcgtcaccatccacaccgcgaaggggcttcagtatccagtg
gccttctgcccctttctgtggggcggggcgctggaacggcgcgacgccgcgttctggcgc
taccacgctgaagatcaatcctggctggcgccggacgccgcggccgacgccggggtgaag
ctggcggcgcgcagcgagttgttggcggagaagctgcgcctgctctatgtggcgctgact
cgggcgcagtatcgccaatacctgtgctggggctgggtgcggggcatggagacggcggct
ttgagctggctgctgcatggccgcgacgcgcgcgcgctgccggaactggagacgctggag
ttggacgccgaggtgctgagacgagagctgggcgctttcgcggccgcggccaacgcccag
gcggcgggcgcgtgcgcggtgctggaggagagcggcgtggggccggccttggccgcgcgg
cgcgaagcaggacggaattatctggcccagacattcacgcgccggctggccgcgccgtgg
cgggtagccagtttcacctcgctgacccatgcgcaggcggccggcaaatggcaggaaagc
ccggaccacgacgcgggtcagccggcggcggcggaactgcaagcgcccccggttttggat
cgtttcggttttccgcgcggcgccaaggccggtacctgcctgcacgagatttttgaaacc
atcagcttcggtgtcgatgcggccgggctgcggcaggcggtggagctggctctggccaag
cacggcttcgcgccggagtggggcgatgccgcttgtgaaatggtgacggccacgctgaac
gcggaactggacccgggcgtgaagctggttgaagtaccggacggcaagcggctggtggaa
atggaattcatgttgccggcgcccaggttggaggtggcgaagctggccgccatcctgtcc
gcgccggaacacggcttggccgcgcctttgcgcgcggccgcggcgcagttggatttttcc
accgtgcgcggttttctcaagggcttcatggacttggtgttcgagtccgacggacgcatt
tatctggtggattataaatccaaccacctgggagggcggcacgaagactatcgcgccgag
cggctggcggaatccatcgcccaagaacattattacctgcaatacctgatttactgcgtg
gctctgcggcgctatttcagcgttcgcggcgtggacttcgccgcccgcttcggcggtgtg
cgttatctttatctgcgcggcgtcggcgtcgaggcctgcgggatctggagcgatcaaccc
gcgccggccctgctggaggcgctggaccaatggttcgccgggcatgcgtag
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integrated database retrieval system
