Chromobacterium haemolyticum: CH06BL_40380
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Entry
CH06BL_40380 CDS
T06734
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
chae
Chromobacterium haemolyticum
Pathway
chae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CH06BL_40380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chae03400
]
CH06BL_40380
Enzymes [BR:
chae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CH06BL_40380
DNA repair and recombination proteins [BR:
chae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CH06BL_40380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BBH14790
UniProt:
A0A5S9EL89
LinkDB
All DBs
Position
complement(4439466..4440239)
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AA seq
257 aa
AA seq
DB search
MRFATWNVNSLKVRLPQVIQWLSDSPVDVLCLQELKMDQDVFPLAEIEAAGYRAAWFGQK
TYNGVAILVRAPLELEDVVCGIPDYGDEQRRVIAATVNGIRVICGYFVNGEAVDSPKYPY
KLEWLANLERYVAAELQRHPQLLLLGDYNIAPEDRDVYDPESWHEQVLCSTPERDSFRRL
IALGLSDSFRLFNQEEKQYSWWDYRAMMFRRNKGVRIDHILVSDALKPRALDCVIDKAPR
KWERPSDHTPVVLTLAD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttgccacctggaacgtcaattccctcaaggtccgcctgccgcaggtgatccaa
tggttgtccgacagcccggtggatgtgctctgcctgcaagaactgaaaatggatcaggat
gtgtttccgctggccgagatcgaagcggccggctaccgcgccgcctggttcggccagaaa
acctacaacggcgtggccattctggtccgcgcgccgctggagctggaggacgtggtgtgc
ggcatcccggattacggagacgagcagcgccgggtgattgccgccacggtgaacggcatc
cgggtgatctgcggctatttcgtcaacggcgaggcggtggattcgcccaagtatccgtac
aagctggaatggctggccaatctggagcgctatgtcgccgccgagttgcagcgccacccg
cagctgctgctgttgggcgactacaatatcgctccggaagaccgcgatgtgtatgacccg
gaaagctggcacgagcaagtgctgtgcagcacgccggagcgcgactccttccgccgtctg
atcgcgttgggcctgagcgacagcttccgactgttcaatcaggaggagaagcaatacagc
tggtgggattaccgcgcgatgatgttccgccgcaacaagggcgtgcgcatcgaccatatc
ctggtaagcgacgcgttgaagccgcgggcgctggactgcgtgatcgacaaggcgccgcgc
aagtgggagcggccgtcggaccatactccggtggtgctgacgctggcggattga
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