Chromobacterium haemolyticum: CH06BL_40920
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Entry
CH06BL_40920 CDS
T06734
Symbol
msbA
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
chae
Chromobacterium haemolyticum
Pathway
chae02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CH06BL_40920 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chae02000
]
CH06BL_40920 (msbA)
Enzymes [BR:
chae01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
CH06BL_40920 (msbA)
Transporters [BR:
chae02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CH06BL_40920 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
DEAD
ABC_ATPase
ABC_membrane_2
AAA_30
AAA_29
nSTAND1
AAA_24
RsgA_GTPase
NACHT
AAA_25
TsaE
DUF815
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BBH14844
LinkDB
All DBs
Position
complement(4496669..4498429)
Genome browser
AA seq
586 aa
AA seq
DB search
MKNSLHSNWAIYRRLLGYLGRYWKVFLISLVSMTVAALTEPAFARLMKPLIDNGFVNRDP
HAIAWVPLAIIGVFAVRGVTSFINEYTSSWLTGHLVQTLREQMFAKMLRLPVQYYADNQS
GRLVSRISYDVNQVTEAGFSVITVTVKDGVTAISLLAWLLYIDWQLTLICLLVLPVVSFC
MRVVGKRLRNLSRENQQNMALLTQVLGEGISCQRVIKVYGGEARESERFHQAAAAIRRNA
VKQSAATSANTGVTQLMIACALAAILYFATLRAQGGAFTAGDFMSFLTAMMLLFAPVKRI
TGIAQAMQRGLAAAESVFDFLDLPEEPDHGRTALPRTRGKLQLSGVNFRYPAAERQVLRD
INLQVNPGETVALVGSSGSGKTTLVSLIPRFYDPDDGEIRLDDVRLQDMPLNDLRRHIAM
VSQDVLLFNDSVAANIAYGEASHSREAVVEAARAANALEFIEAMPEGFDTLIGENGVRLS
GGQRQRLAIARALLKNAPLLILDEATSALDTQSERLVQSALENLMKNRTTIVIAHRLSTI
ESADRIVVMHHGEIAEEGSHAQLLAREGLYAKLHSLQFKDEDGEAG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattctttgcatagcaactgggcgatctaccgccgcttgctgggatatttgggc
cgttattggaaggtctttctgatctcgctggtgtcgatgacggtggcggccttgaccgag
ccggccttcgcccgcctgatgaagcccttgatcgacaacggtttcgtcaaccgcgacccg
catgcgatcgcctgggtgcccttggccatcatcggcgtgttcgcggtgcgcggcgttacc
agcttcatcaatgaatacacctccagctggctgaccgggcatctggtgcagacgctgcgc
gaacagatgttcgccaagatgctgcgcctgccggtgcagtactatgccgacaaccagtcc
ggccgtctggtgtcgcggatttcctacgacgtcaaccaggtcaccgaagccggcttcagc
gtgatcacggtcacggtcaaggacggcgtcaccgcgatcagcctgctggcctggctgctg
tacatagactggcagttgacgctgatctgtctgctggtgctgccggtggtgtcgttctgc
atgcgggtggtgggcaagcgcctgcgcaatctgtcgcgcgagaaccagcagaatatggcc
ttgttgacccaggttttgggcgagggcatcagttgccagcgcgtgatcaaggtctacggc
ggcgaagcgcgcgagagcgagcgctttcaccaggcggcggcggccatccgccgcaacgcg
gtcaagcagagcgcggcgacctccgccaacaccggcgtcactcagctgatgatcgcctgc
gccttggccgccatcctgtatttcgccacgctgcgcgcgcagggcggcgcgttcaccgcc
ggcgacttcatgtccttcttgaccgcgatgatgctgctgttcgcgccggtgaaacgcatc
accggcattgcccaggcgatgcagcgcggcctggcggcggcggagtcggtcttcgatttc
ctcgacttgccggaagagcccgatcacggccgcaccgccttgccgcgcacacgcggcaag
ttgcagctgtcgggggtgaatttccgctacccggcggcggagcggcaggtgttgcgagac
atcaacctgcaggtcaatcccggcgaaaccgtcgccttggtcggttcgtccggcagcggc
aaaaccaccctggtcagcctgattccgcgattttacgatccggacgacggcgaaatccgt
ttggacgacgtgcgcttgcaggacatgcccttgaacgatctgcgccggcatatcgccatg
gtcagccaggacgtgctgttgttcaatgacagcgtggcggccaatatcgcctacggcgaa
gcctcgcacagccgcgaagcagtggtggaagccgcgcgcgcggccaatgcgctggagttc
atcgaggcgatgccggagggctttgacaccctgataggcgaaaacggcgtacgcctgtcc
ggcggccagcgtcagcggctggcgattgctcgcgccctgctgaagaacgcgccgctgttg
attctggacgaggcgacttcggcactggacacgcagtcagaaagactagtgcaaagcgcg
ctggaaaacctgatgaagaatcgcaccactatcgtgatcgcccatagactgtcgacgatt
gaaagcgccgatcgtatcgtggtgatgcatcacggcgagatcgccgaggaaggctcgcac
gcgcagctgctagcgcgcgaaggactctacgccaagctgcacagcctgcagttcaaggac
gaggacggcgaggcgggctga
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