KEGG   Chromobacterium haemolyticum: CH06BL_41280
Entry
CH06BL_41280      CDS       T06734                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
chae  Chromobacterium haemolyticum
Pathway
chae03030  DNA replication
chae03410  Base excision repair
chae03420  Nucleotide excision repair
chae03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CH06BL_41280 (polA)
   03410 Base excision repair
    CH06BL_41280 (polA)
   03420 Nucleotide excision repair
    CH06BL_41280 (polA)
   03440 Homologous recombination
    CH06BL_41280 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chae03032]
    CH06BL_41280 (polA)
   03400 DNA repair and recombination proteins [BR:chae03400]
    CH06BL_41280 (polA)
Enzymes [BR:chae01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CH06BL_41280 (polA)
DNA replication proteins [BR:chae03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CH06BL_41280 (polA)
DNA repair and recombination proteins [BR:chae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CH06BL_41280 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CH06BL_41280 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: BBH14880
LinkDB
Position
complement(4532137..4534905)
AA seq 922 aa
MKTLLLIDGSSYLYRAFHAMPDLRSPDGRPVGAVYGMVNMLRRLEKEVQFDYSACVFDAK
GKTFRDDLYPEYKANRPSMPEELASQITAVHEVVQASGWPMLVVPGVEADDVIGTLARTG
AAAGMRVIISTGDKDMAQLVDGLVSIVNTMTNETFDRDGVKDKFGVPPELIVDYLTLIGD
KVDNVPGVDKCGPKTAVKWLEQYGNLDAIIAQAAEVGGKVGENLRAALDWLPKGRELITI
KCDVDLNADMPYGLDSLQHGVKDKPRLAELYQGLGFRTFYREVTEGEDMPAVAQTAAGAQ
GDDLFAIEAAQDSPALPETVAERRYETILDAAQLDAWLAKLAAAEVVSLDTETTSLDQMQ
ARIIGLSFSVRSGEAAYLPLGHHYAGAPEQLDLEQSLSKLKPWLENADRKKCGQNLKYDR
HVFANHGIRLAGVIDDSLLASYVVESHERHNMDDLARRHLGESTVSYEEICGKGAKQIGF
GEVDVDTASNYAAEDADITLRLNQYFSGLLTGRLREVYRDIELPVAEVLFTMERHGVLID
RDRLAAQSHQLGTEMLRLESQAYELAGQPFNLNSPKQLQEILFGKLAIPTKGVKKTPSGG
YSTDESVLEALALDHPLPKCILEYRGLAKLKSTYTDKLPLLINAATGRVHTNYAQAVAIT
GRLASSDPNLQNIPVRTPEGRRVREAFIAPPGHVIVSADYSQIELRIMAHLSDDAGMLQA
FASGEDIHRATAAEVFGVELSQVSPDQRRAAKAINFGLIYGMSAFGLAAQLDIERSAAQQ
YIDRYFMRYPGVAEYMQTTRETAREQGYVETVFGRRLYLPEIKLSNPARRAGAERAAINA
PMQGTAADLIKLAMIAVQNWLQDDAMGSKLIMQVHDELVLEVPEAELERVKRRLPEIMAG
VAKLKVPLLAEVGAGESWESAH
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgaaaacactgttattgatcgacggctcttcttatttgtaccgcgcctttcacgcgatg
cccgatttgcgctctccggatggccgcccggtgggggctgtctacggcatggtgaacatg
ctcaggcggctggagaaggaagtgcagttcgattatagcgcctgcgttttcgacgccaaa
ggcaagacgtttcgcgacgacctttaccccgaatacaaggccaatcgcccgtcgatgccg
gaggaactcgcctcccagattacggcggtccatgaggtggtgcaagcctcgggctggccg
atgctggtggtgccgggggtggaagccgacgacgtgatcggcacgctggcgagaaccggc
gcggcagccggcatgagggtaatcatttccactggcgacaaggacatggcgcaattggtg
gatggcctggtttccatcgtcaacaccatgaccaatgaaaccttcgaccgggacggggtc
aaggacaagttcggcgtgccgccggaattgatcgtcgactatctgaccctgatcggcgac
aaggtggacaatgtgccgggcgtcgacaagtgcggccccaagaccgcggtcaagtggctg
gaacagtacggcaatctggacgccatcatcgcccaggcggcggaagtgggcggcaaggtg
ggagagaacctgcgcgcggcgctggactggctgcccaagggccgcgagctgatcaccatc
aagtgcgatgtcgatctgaacgcggacatgccttacggcctggacagcctgcaacatggc
gtcaaggataagccgcggctggccgagttgtaccaaggcctgggcttccgtaccttctac
cgcgaagtgaccgagggcgaggacatgccggcggtggcgcaaaccgcggcaggcgcgcag
ggcgacgatctgtttgccattgaggcggcgcaggacagcccagccttgccggagacggtg
gcggagcggcgctatgaaaccattctggacgcggcgcagctggacgcctggctggccaag
ctggcggcagcggaggtggtgtcgctggataccgagaccaccagcctggaccagatgcag
gcgcgtattatcggcctcagtttctcggtgcgttccggcgaggccgcctatttgccgttg
ggtcatcactatgccggagcgcctgagcaattggatctggagcaaagcctatccaagctc
aaaccttggctggagaacgccgacaggaaaaaatgcggccagaacctgaagtacgatcgt
catgtgttcgccaatcacggcattcgcctggcgggcgtgatcgacgattccctgctggcc
tcctatgtggtggaaagccatgagcgccacaatatggacgatctggcgcgccgtcacctg
ggcgaatccacggtcagttacgaggagatttgcggcaaaggcgccaagcagatcggtttc
ggcgaggtggacgtggacactgcgtccaactacgcggccgaggacgccgacatcacgctg
cgcttgaatcaatacttctccggcttgctgacaggacgcttgcgcgaggtctaccgcgac
atcgagctgccggtggccgaggtgttgtttacgatggaacgacatggggtgttgatagat
cgcgaccggctagcggcgcaaagccaccaattgggcacggaaatgctgcggctggagagc
caggcttatgaattggccggccagccgtttaatctgaactcgcccaaacagttgcaagaa
atcctgttcggcaagttggccattcccaccaagggcgtgaagaagactccgtccggcggt
tattccactgatgagtcggtgttggaggccttggcgctggatcacccgttgcccaagtgc
atcctggaataccgcggcctggccaagctcaagtccacttacaccgacaaattgccgctg
ctgatcaatgctgccaccggccgagtgcataccaattatgcgcaagcggtggcgatcacc
gggcgcttggccagctcggaccccaatctgcagaacattccagtgcgaacaccggaaggg
cgtcgagtgcgggaggccttcatcgcgccgccggggcacgtgatcgtcagcgccgattat
tcacagattgagctgcgcatcatggctcatttgtccgacgacgccggcatgctgcaggcc
ttcgccagcggcgaggacatccaccgcgccaccgccgccgaggtgttcggcgtggaattg
tcccaagtcagccctgatcagcggcgcgccgccaaggcgattaacttcggcctgatctac
ggcatgagcgccttcggcctggctgcgcagctggacatagagcgcagcgccgcccagcaa
tacattgaccgttacttcatgcgctatccgggcgtggcggagtatatgcagaccacgcgc
gaaaccgcgcgcgagcaaggctatgtggaaaccgtgttcggtcgccgcctgtacctgcct
gagatcaagttgtcgaacccggcgcgacgcgccggcgcggaacgcgcggcgatcaacgcg
ccgatgcagggtacggcggcggatctgatcaaactggcgatgatagcggtgcagaactgg
cttcaggacgacgccatgggcagcaaactgatcatgcaggtgcacgacgaactggtgctg
gaagtgccggaagccgagttggagcgggttaagcggcgtttgcctgagatcatggccggc
gtggccaagctcaaggtgccgctgttggcggaggtgggcgcgggggaaagttgggaaagc
gcgcactga

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