Corynebacterium hansenii: CHAN_03740
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Entry
CHAN_03740 CDS
T09360
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chan
Corynebacterium hansenii
Pathway
chan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHAN_03740 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chan03019
]
CHAN_03740 (recQ)
03400 DNA repair and recombination proteins [BR:
chan03400
]
CHAN_03740 (recQ)
Enzymes [BR:
chan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHAN_03740 (recQ)
Messenger RNA biogenesis [BR:
chan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CHAN_03740 (recQ)
DNA repair and recombination proteins [BR:
chan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CHAN_03740 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
HEM4
Rrf2
RecQ_Zn_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WJY99371
LinkDB
All DBs
Position
complement(822051..824384)
Genome browser
AA seq
777 aa
AA seq
DB search
MNAGDSSQSPQPPTERPRHDQAPHDQAPYEPATRAEADELLQGLAGPETSLRDDQWRAID
GLVNARERLLVVQRTGWGKSAVYFIAAKLLRRRGRGASVIISPLLALMRNQVAAARRAGI
RAETVNSANMTEWDDIQRRVAAGEVDVLLVSPERLNNPQFRDDVLPSLARAAGMVVVDEA
HCISDWGHDFRPDYRRIRDLLAGLGEGVPVLATTATANDRVVEDVRSQLGDGTGVLRGGL
DRESLRLSVVRLPDTTKRPAWLAQHLRELPGSGIIYCLTVAAAEDLAQALGAAGYEVAAY
TGRTDAAERERLEAALLDNEVKALVATSALGMGFDKPDLGFVVHMGAPGSPISYYQQIGR
AGRGTERAEVVLLPGAEDRDIWEYFASLSFPEEDVVRSLLDALAAYGGQPASTARLETAV
DLSRSRLEQVLKVLDVDGAVRRVRGGWVSTGAQWEYDAARYGGLAEARKAEQDAMVAYER
LGDDGSTGADACRMLFLRRQLDDPTATGPCGRCDNCTGRRLSPDVDADVDEIVRVRLTEP
GVRMPARKQWPTGLDRLMAGGEGLGRAGATLGATGLRVPLKGKIHGVGEGRAIGRLNDIA
RGPALTELLAAASWRPDAAEWKRDRTLRNLVEVLAGWDWDTRPDTVVALVTHDAVDPAGG
ATAGAAGTSEALHGSALDEMVVACAIAVADIGRMGFGGVLPVRDGSRPVEAQNSAYRVAG
LADRWDWVAIGALELGEGPILLVTDCVDTGWSVTLAAAALASATGREVLPLALASRG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccggcgattcgagccagtccccccagcccccgaccgagcggccccggcatgat
caggcgccgcatgatcaggcgccgtatgagcccgccacccgcgcggaggccgatgagctg
ctgcaggggttggccgggccggagacgtcgttgcgcgacgaccagtggcgggccatcgac
gggctggtcaacgcccgcgaacgcctgctggtggtgcagcgcacgggctggggcaagtcg
gcggtgtacttcatcgccgcgaagctgctgcggcggcgcgggcgcggggcgagcgtgatc
atttcgccgctgctggcgctgatgcgcaaccaggtcgcggcggcgcggcgggcgggcatc
cgggccgagaccgtcaacagcgcgaacatgacggagtgggacgacatccagcggagggtg
gcagccggcgaggtcgacgtgctgctggtgtcccccgagcggctgaacaacccgcagttc
cgcgacgacgtgctgccgtcgctggcgcgggcggcgggcatggtcgtggtcgacgaggca
cactgcatctccgactggggccatgacttccggcccgattaccggcgcatccgcgatctg
ctcgccgggctcggcgagggcgtgcccgtgctggcgaccaccgcgacggccaacgaccgc
gtggtggaggacgtgcgttcccagctcggcgacggcaccggcgtgctgcgcggcgggctc
gaccgggagtcgctgcggctgagcgtggtgcgtttgccggatacgacgaagcggccggcg
tggctggcgcagcatctgcgcgagctgccgggctcgggcatcatctactgcctgaccgtg
gcggcggcggaggacctggcccaggcgctcggcgccgcggggtacgaggtcgccgcgtac
accgggcgcaccgacgccgccgagcgcgagcggctggaggcggcgctgctggacaacgag
gtcaaggcgctggtggcgacgtcggcgctgggaatgggcttcgacaagcccgacctgggg
ttcgtggtgcacatgggcgcgccgggatcgccgatctcctactaccagcagatcggacgc
gccggccgcggcaccgaacgcgccgaggtcgtgctgctgcccggagccgaggatcgggac
atctgggagtacttcgcatcgctgtcgttccctgaagaggatgtggtgcggtcgctgttg
gacgcgctggcggcgtacgggggtcagccggcgtcgacggcgcggttggagaccgccgtg
gacctgtcgcggtcgcggctcgagcaggtgctgaaggtgctcgacgtcgacggtgcggtg
cggcgcgtgcgcggtggctgggtgtccacgggcgcgcagtgggagtacgacgccgcccgt
tacggcggcctggccgaagcccgcaaggccgagcaggatgcgatggtcgcctacgagcgg
ctcggcgacgacgggagcaccggcgccgacgcgtgccggatgctgttcctgcgccgccag
ctcgacgacccgaccgcgacggggccgtgcggacggtgcgacaactgcaccggtcggcgc
ctgtcccccgacgtcgacgccgacgtggacgagatcgtgcgcgtgcggctgaccgaaccg
ggcgtgcgcatgcccgcgcgaaagcagtggccgaccgggttggaccggctcatggccggt
ggcgaggggctggggcgcgccggggcgacgctcggcgcgaccgggctgcgcgtgccgctg
aaggggaagatccacggcgtgggcgaggggcgcgcgatcggccgcctcaacgacatcgcg
cgggggcctgcactgacggagttgctcgcggcggcgtcgtggcggcccgatgccgcggaa
tggaagcgcgaccggacgctgcgcaacctggtcgaggtgctcgcgggctgggattgggac
acgcggccggacaccgtcgtcgcgctggtcacccacgacgcggtcgatcccgcgggcgga
gcgacggcgggcgcggccggcacgagcgaagccctccacggttccgcgttggacgagatg
gtggtggcctgcgccatcgccgttgccgacatcgggcgcatgggcttcggtggtgtgctg
cccgtgcgcgacggatcacgccccgtcgaagcccagaactccgcctaccgggtggccggt
ctggccgatcggtgggattgggtggccatcggcgcactcgagctcggcgaggggcccatc
ctgctggtcaccgactgcgtggacacgggctggtcggtgactctcgccgcagctgcgctg
gcgtcggcgactggccgcgaagttctccccctggcgctggcctcgaggggctga
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