Corynebacterium hansenii: CHAN_05155
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Entry
CHAN_05155 CDS
T09360
Symbol
lgrB
Name
(GenBank) Linear gramicidin synthase subunit B
Organism
chan
Corynebacterium hansenii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Condensation
AMP-binding
AMP-binding_C
PP-binding
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
WJY99653
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All DBs
Position
1173014..1178965
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AA seq
1983 aa
AA seq
DB search
MRDLEEVRRLMARHRGESGTVADRPARSLPDRAPASAAQKSVWLASALDPDDVSYNLCLK
FTFEGRIDAEALAGAFGDLVDRHEVLRTTYHADDEGALQQRIHADLEPEITRHAMPPGDA
GDAAVDALAAEQVRRPFDLAAQSPLRLAICERGPGRVDAVMVIQHIAWDGMTMPVLARDV
ARAYRLRTGRPTEGDGSVPPLAVQVADFAEWEATHPDASGEDHWRSVFPDGVPQMRPMLG
GAADAPPNAGGRVDAVLPDDAARALTAIAEESSVTPFAVFLAAHHLVLRAVTGARDTVTG
TTVANREAVGADELIGNFSNQVPIRISDGGAETFGDLVLRAARSITGAMSAKSVPFDRIA
AIAGVDRAAGETLFPVLVLFLHEGIAGPRLPGAETSWELVHADAALHAVATEAFMHPGRV
EVQMTHRLDSVSAEGARALQRALAAVLSNAGADVPTEELAQVARAEIESAAAPASAMGRG
RRVPVEPGDVDAMIRAASAASPDAVAVVAEDRTLTYAEFDARVSALAARLAEAGARAGEI
VAVVAERGSWLPCAIAAVIRTGAAVVPVDPRYPAERIRMMLDDAAPAAIVRAGDVPLPDT
AAAIVEVERIDEEGPEAGTPEFVPARPIRGDDPVYLIYTSGTTGRPKGVVNHHRGVASHL
QWMARTFGDGPIRMLHKAPISFDVGMGEVLLALTSGGTAVIPPADWWAGDAEGLASMIEE
HRVTVLSLVPGLLRELLAAGAAGRLRTLRHLLLGGEAVPTDLARRARAEIGCRVHGLYGP
SETAMDVAWVEYGDDFPEDGFLLGAAEDNNDLHVLDENLRELPVGEAGELCIGGVQVGHG
YHGAPDATADAFVDDPFEPGGTLYRTGDVAKWGADGMLRFLGRIGDQVKIRGNRVELLDI
DAALCRVHGVAAGACRLFGVTGAPARLVGYVVAADGGKPDERAILAELARALPAYMVPGT
IVAVDSLPTTATGKLDRAALPERPGAHAGGGDADEPRGAAELAVADAFARAIGKDVRPTA
QSGLIELGGDSITAIRAISLLRRSGWEAEVRDILGGGTVRTVAAAARPVSATDPADGADG
GGFAAPAPVHPLAAALLESAPGGGGLCQARLLTAPADFGAERLSEVLQRLAGLHPVLSRA
VADDGGWPMFAEPSAGAEPFTMAEAEAEVAAADGVGELIAELASRLDPARGTMLAGAVAE
LPAGRRIVLVAHHLVVDAVSWETLIDDFRDLRGVAKHTAADRRPEAAVADHARRLRAATL
SGEFDEDLAAWEKIAADASGTLAIDPARDTEATVDIAEITMPEASSAALAGGVERAFGCR
GQDLLIAGLSMALRRLGLDADGTVGLTLESHGRDATGSVPPVPPDAVGWFTAAYPVAVEV
GDGLDPVAAVHAVRRARRRLPDDVHVHGCAIWLGGRPAPRPIACLNHLGTVASDVPEGDF
APAPEAPALIGAADASAPLPNVIDVMSHVGADGLLAATIRVAAKVPGAPGAADVGRELGA
ALADIAAAAATGDARRAPADFTAPGITDADVRAWGGEIEDVLPLTPMQEGLMLSSLTSGD
PAGYAVQTPLRVRGRVDAAALGRAVGAVLRRFPNLRIQPAATVDGTPVGVVRPCGAFGCR
VRDANRAPDLIAADAAEGFDFAAAPLLRVTVAHPGDGADGETLVLISAHHILTDGWTGQL
LPVAIFAEYAREIGADPGAGRIGDPGAFPALLEAIAEDGPEARRAWEARLRGVAPALVGP
ESTPTRAGQSSRMSSVGQDVVDRLHAVTRRLGVTPAVAYQAAWARTLGIVLGRGDVVFGE
VVSGRDPSIAGVAEGIGCFANLVAVPASVDPSGTWAGALAQMRDERLPLLGHDHFPMTRA
LSVTGARRLFDTMFVHQSYPPHQDRLASILESCGLGHVGTDPGGTTDNAALLMVFPGDSV
IGGAGTRFLFTFAAGVIDDAAAEVIEKLFLGCVRAIADAPDAAIADGPVPDEFDAMALGG
ILR
NT seq
5952 nt
NT seq
+upstream
nt +downstream
nt
atgagggacctggaagaggtgcggcggctgatggcccggcaccgcggcgaatccggcacg
gtggccgaccgcccggcccggtcgctgccggatcgggcgcccgcgtcggcggcgcagaaa
tcggtgtggctggcctcggcgctcgacccggacgacgtgtcgtacaacctctgcctgaag
ttcaccttcgagggccgcatcgacgccgaagcgctcgcgggggccttcggggatctcgtc
gacaggcacgaagtgctgcgcacgacgtaccacgcagacgacgaaggagccctgcaacag
cgcatccacgccgacctcgaaccggagatcacccggcacgcgatgccgccgggcgacgcg
ggcgacgccgccgtcgatgcgctggccgccgagcaggtccgccggcccttcgacctggcg
gcgcagtcgccgctgcgcctggccatctgcgaacggggccccgggcgggtggatgcggtg
atggtgatccagcacatcgcctgggacgggatgaccatgcccgtgctggcccgggacgtc
gcccgcgcgtatcggctgcgcaccggccggcccaccgagggggacggctccgtcccgccg
ttggccgtccaggtcgccgacttcgcggaatgggaggcgacccatccggacgcttccgga
gaggaccattggcgttccgtgttcccggacggtgtgccgcagatgaggccgatgctcggc
ggggccgcggatgctcccccgaacgccggtggacgggtcgacgcggtgcttcccgacgac
gccgcgcgggcgctgacggccatcgcggaggagtcgtcggtgaccccgttcgccgtgttc
ctcgcggcgcatcatctggtgctgcgcgcggtgaccggggcgcgggacacggtgaccggc
acgacggtggccaaccgggaggccgtcggcgcggatgagctgatcggcaacttcagcaac
caggtgcccatccggatctcggacgggggagcggagacgttcggcgatctggtgctgcgg
gccgcacggtccatcaccggcgcgatgtcggcgaaatccgtccccttcgatcggatcgcc
gccatcgcgggggtcgaccgggcggcgggggagaccctgttcccggtgctcgtcctcttc
ctccacgagggcatcgccgggccgcggctgccgggcgcggagacctcgtgggagctggtc
cacgccgatgccgcgctccacgcggtggccacggaggcgttcatgcacccgggccgggtg
gaggtccagatgacccaccgcctggactccgtgtcggccgagggggcgcgggccctgcaa
cgggcgttggccgcggtgctgtcgaacgcgggcgccgacgtgccgacggaggaattggcg
caggtggcgcgggccgagatcgagtcggccgccgcgcccgcctccgcgatgggccggggc
cgccgggtgccggtcgagcccggcgacgtcgacgcgatgatccgcgcggcgtcggccgcg
tccccggatgcggtggcggtggtcgcggaggaccgcactctcacctacgccgagttcgat
gcgcgggtctcggccttggccgcgcggctcgcggaggcgggggcgcgcgccggcgagatc
gtcgccgtcgtcgccgaacgcggttcgtggctgccctgcgcgatcgccgccgtgatccgc
acgggcgcggcggtggtcccggtggatccccggtaccccgccgagcggatccggatgatg
ctcgacgacgccgcacccgcggccatcgtccgcgccggcgatgtcccgctgccggacacg
gcggccgcgatcgtcgaagtggagcgtatcgatgaggaggggccggaagccggaacgccc
gaattcgttccggcgcggcccatccgcggcgacgacccggtctacctcatttacacgtcg
gggacgacgggccggcccaagggagtggtcaaccaccaccggggcgtcgcgtcccatctg
cagtggatggcccgcaccttcggcgacggcccgatccggatgctgcacaaggcgccgatc
tcgttcgacgtgggcatgggcgaagtgctgctggccctgacttccgggggcacggccgtg
attcccccggccgattggtgggcgggggacgccgagggccttgcctcgatgatcgaggaa
caccgggtcacggtgctgtcgctggtgcccggcctgctgcgcgagctgctcgcggcgggc
gcggccgggcggctgaggacgctgcgccacctgctgctcggcggcgaagcggtgcccacc
gatctcgcgcgccgggcgagggcggagatcggctgccgcgtgcacggcctctacggcccg
agcgaaactgcgatggacgtcgcctgggtggaatacggcgatgatttcccggaggacggc
ttcctgctcggcgccgccgaggacaacaacgacctccacgtcctggacgaaaacctgcgg
gagctgcccgtcggcgaggccggcgagctgtgcatcggcggggtgcaggtcggccacggg
tatcacggggccccggacgccaccgcggatgccttcgtggacgaccccttcgaacccggc
ggaaccctgtaccgcaccggcgacgtggcgaaatggggagccgacggcatgctgcgcttc
ctcggccgcatcggcgaccaggtgaagatccggggcaacagggtggaactgctcgacatc
gacgcggcgctgtgcagggtgcacggggtcgcggccggcgcgtgccggctcttcggggta
accggcgcaccggcgcggctcgtgggctacgtggtcgcggccgacggcggaaagccggac
gagcgcgccattctcgcggagctggcccgggccctgcccgcgtacatggtgcccgggacg
atcgtcgcagtggattccctccccacgaccgcgaccgggaaactcgaccgcgcggccctg
ccggaacgcccgggcgcacatgccggcggaggcgacgccgacgaaccgcgcggggcggcc
gagctggccgtcgccgatgcgttcgcgcgcgccatcgggaaggatgtccggccgaccgcg
cagtccgggctgatcgagctcgggggcgattccatcacggcgatccgcgcgatctcgctg
ttgcgccgcagcggctgggaggccgaggtgcgcgacatcctcggcggcgggaccgtccgc
accgtggccgccgccgcgcggccggtgtccgcgacggatcccgccgacggggcggacggc
gggggattcgccgcgccggcccccgtccatccgttggccgcggcgctgctggagtcggcc
cccggcggcggtggcctgtgccaggcgcggctgctgaccgcgccggcggatttcggcgcg
gaacggctgtcggaggttctgcaacgcctggccgggctccaccccgtcctctcccgcgcg
gtggccgacgacggcggatggccgatgttcgcggagccgtccgccggcgccgaaccattc
acgatggcggaggcggaggcggaggtcgccgccgcggacggggtcggggaactgatcgcg
gagctcgcctcccggctcgatcccgcccgcgggacgatgctcgccggcgcggtggccgaa
cttcccgccgggcgccgcatcgtgctggtcgcccatcacctcgtcgtcgacgcggtgtcc
tgggagaccctcatcgacgacttccgcgatctccgcggcgtcgcaaagcacaccgccgcc
gaccgccggccggaagcggccgtcgcggaccatgcgcgccgcctgcgcgccgccacactg
tcgggcgaattcgacgaagatctcgcggcctgggagaagatcgccgcggacgcatcgggg
acgctggccatcgacccggcccgcgacaccgaagcgacggtcgacatcgcggagatcacc
atgcccgaagcgtcgtccgccgcactcgccggcggcgtggagcgggccttcgggtgccgc
gggcaggacctgctcatcgccgggctgtccatggcgctgcgccggctgggcctcgacgcc
gacggcacggtcgggctgaccctcgaatcccacggccgcgacgcgaccggctccgtgcca
ccggtgccgcccgatgcggtgggatggttcaccgccgcgtaccccgtcgcggtggaggtc
ggcgacggcctcgaccccgtcgccgcggtgcacgccgtgcgccgggcccgccggcgcctg
cccgatgacgtccacgtccacggctgcgccatatggctgggcgggcgaccggcgccccgg
cccatcgcctgcctgaaccacctcgggaccgtcgcctccgatgtcccggaaggggacttc
gcgcccgccccggaagcccccgccctcatcggcgcggccgatgcgtcggcgccgctgccc
aacgtcatcgacgtgatgtcgcacgtcggcgcggacgggctgctggccgcgaccatcagg
gtcgccgcgaaggtgcccggcgcacccggcgccgcggacgtcggccgggagctcggggcc
gcgctggcggacatcgcggccgcggcggcgacgggggatgcccggcgcgcacccgccgat
ttcaccgcccccggcatcacggacgccgacgtccgcgcctggggcggcgagatcgaggac
gtgctgccgctgacgccgatgcaggaagggctgatgctttcgtcgctgacctcgggcgat
cccgcgggatacgcggtgcagacgccgctgcgcgtgcgcggccgcgtcgatgccgcggcg
ctgggccgagccgtcggcgccgtgctgcggcggttccccaacctgcgcatccaacccgcg
gccacggtggacggcaccccggtgggcgtcgtcaggccctgcggcgcgttcggctgccgg
gtccgcgacgcgaaccgggcccccgacctcatcgccgccgacgccgccgagggattcgac
ttcgccgccgcgcccctgctgcgggtcacggtcgcgcaccccggcgacggcgcagacggc
gagacgctggtgctcatctcggcccaccacatcctcaccgacggctggaccgggcagctg
ctgcccgtggccatcttcgccgaatacgcccgcgagatcggggccgacccgggcgccggc
cgcatcggcgaccccggggcgttcccggcgctgctcgaggcgatcgcggaagacgggccg
gaggcccggagggcctgggaagccaggctgcgcggggtcgccccggcgctggtcgggccg
gagtccacgcccacccgggcgggtcagtcgtcgcgcatgagctcggtcggccaggacgtc
gtggaccggctccacgcggtcacccgccgactcggggtcaccccggccgtcgcctaccag
gcggcgtgggcgcggaccctcgggatcgtcctcggcaggggcgacgtcgtgttcggggag
gtcgtgtccgggcgggatccctccatcgccggagtggcggagggcatcggctgcttcgcc
aacctcgtcgccgtcccggcgtcggtcgacccctccggcacctgggccggcgcgctggcg
cagatgcgcgacgagcgcctgccgctgctgggccacgaccatttccccatgacccgggcg
ctgtccgtcacgggcgcgcgccggttgttcgacaccatgttcgtgcaccagtcctacccc
ccgcaccaggaccggctcgcgtcgatcctggagtcctgcgggttgggccacgtcggcacc
gacccgggcggcaccacggacaacgcggcgctgctgatggtgttccccggggactccgtc
atcgggggagcggggacccggttcctgttcaccttcgccgcgggcgtcatcgacgacgcc
gcggcggaggtcatcgaaaagctcttcctcgggtgcgtgcgcgccatcgccgacgccccg
gacgcggcgatcgcggacgggcccgtgcccgacgaattcgatgccatggccctcggggga
attctccgctga
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