Corynebacterium hansenii: CHAN_05390
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Entry
CHAN_05390 CDS
T09360
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
chan
Corynebacterium hansenii
Pathway
chan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHAN_05390 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chan03400
]
CHAN_05390 (fpg1)
Enzymes [BR:
chan01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CHAN_05390 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CHAN_05390 (fpg1)
DNA repair and recombination proteins [BR:
chan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHAN_05390 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
C1_2
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
WJY99697
LinkDB
All DBs
Position
1222758..1223606
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AA seq
282 aa
AA seq
DB search
MPELPEVETIRIGLDPHVRGRRITGARVLRDRAVRRQPGGAAEFGERLVGRTITGTGRRG
KFLWLTLDDASALLIHLGMSGQLIVPGPDTPPSPHVRATLELDGLTLQFRDQRTFGWVWA
CDAGADGVPEPAAHIARDLMDPRVDPVALAHVIRRRTSGIKRVLLNQEVVSGIGNIYADE
MLWAARVHGETPADELSVRTLAKLLRAGREVMGRAVKVGGTSFDSLYVNVNGESGYFSRD
LEAYGREGEPCSRCGRPIVRSTFMNRSSYHCPRCQRLPREAA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcccgaagtcgagacgatccgcatcgggctcgatccccacgtccgcggg
cgccgcatcaccggcgcgcgcgtgctccgcgaccgtgcggtgcgccgtcagccgggcggt
gccgcggagttcggcgaacgcctggtcggccgcaccatcacgggcaccggccggaggggc
aagttcctgtggctgacgctcgacgacgcctccgcgctgctcatccacctgggcatgagc
ggccagctgatcgtgcccggcccggacacgccgccctcgccgcacgtgcgcgccacgctc
gaactcgacggcctgacgctgcagttccgcgaccagcggacgttcgggtgggtgtgggcc
tgcgacgccggcgccgacggcgtgccggagccggccgcgcacatcgcccgcgacctgatg
gatccgcgggtggaccccgtcgcgctcgcccacgtgatccgccgccgcaccagcggcatc
aagcgcgtgttgctcaaccaggaggtcgtttcgggcatcggcaacatctacgccgacgag
atgctgtgggccgcccgcgtccacggcgagacccccgccgacgagctgtcggtgcgcacg
ctggcgaagctcctgcgggcgggccgcgaggtcatgggccgggcggtcaaggtcggcggc
accagcttcgactcgctgtacgtcaacgtcaacggcgaatcgggctacttctcccgcgac
ctggaggcgtacggccgcgaaggcgagccctgctcccgctgcggccggccgatcgtccgg
tcgacgttcatgaaccgttccagctaccactgcccgcggtgccagcggctgccgcgggag
gccgcatga
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