Corynebacterium hansenii: CHAN_08180
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Entry
CHAN_08180 CDS
T09360
Symbol
polC2
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chan
Corynebacterium hansenii
Pathway
chan03030
DNA replication
chan03430
Mismatch repair
chan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHAN_08180 (polC2)
03430 Mismatch repair
CHAN_08180 (polC2)
03440 Homologous recombination
CHAN_08180 (polC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chan03032
]
CHAN_08180 (polC2)
03400 DNA repair and recombination proteins [BR:
chan03400
]
CHAN_08180 (polC2)
Enzymes [BR:
chan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHAN_08180 (polC2)
DNA replication proteins [BR:
chan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHAN_08180 (polC2)
DNA repair and recombination proteins [BR:
chan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHAN_08180 (polC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PTCB-BRCT
BRCT
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WJZ00245
LinkDB
All DBs
Position
1881028..1882566
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AA seq
512 aa
AA seq
DB search
MQVLDFRLSGAIVRVTPGPPASVTVHRIARTRSTDVSGATALLSDASDSASLTVPGVLLP
GRIEFGGDLPAARVTPSTLPAAEALLALLEAGAADDGAAADAVSRALAEAPDNPVAGVTI
VDADESFEATGNGAGASATGAGTGTGAGAGGAASGGDGAPAPAPKLGGDIPDPDFFAFDV
ETANADEGSVIQFGIAAVRDGAVTDTYSWLCRPPAGLEQFDEDNVAIHGITPTDVVDAPS
FAQRAEEFGRLVDGTPVVAHNAKFDFTALKRGCKAAGIDVPDVAWACTYEWARRVGLQVE
NYRLPTLAREAGAADFSHHDASDDAVACAEVALWLMREHPGDEPTLNPVKYTENLGMEMG
MLFGTRLVPMRTTGQSQVGSGGAGRRKAGSRRRPGGAQDRRAKWDAVKAPEVIPEKNEDA
DPDGLLYGQRVTLTGDFAPYDKGRLWELIAQAGADINKGVTKKTTILVAGPWDSMTSKEK
KAREYKEKGQDIDIWNEKQLFAVLGLEEEPPF
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttctcgatttccgactgtccggcgcgatcgtccgcgtcaccccgggtcccccg
gcgtccgtcacggtgcatcgcatcgcccggacgcgcagcacggacgtctccggcgccacg
gctttgctttccgacgcttcggattcggcgtcgctgaccgtgcccggcgtgctcctcccc
ggccggatcgagttcggcggcgacctgcccgccgcccgagtgactccctcgacgctcccc
gcagcggaggccctcctggcgctgctggaagccggcgcggcagatgacggggcggccgcg
gacgcggtttcccgggcgttggccgaagccccggacaatccggtcgccggcgtcaccatc
gtcgacgccgatgagtccttcgaggcgacgggcaacggcgccggcgcttccgccaccggc
gcgggcacgggaacgggggccggcgcaggaggcgccgcttccggcggggacggcgctccg
gcccctgcgccgaagctcggcggggacatccccgatcccgatttcttcgcattcgacgtc
gagaccgccaacgcggacgagggctcggtcatccagttcggcatcgcggcggtccgcgac
ggcgcggtcaccgacacgtactcgtggctctgccgtcccccggccgggctcgagcagttc
gacgaggacaacgtcgccatccacggcatcacgcccaccgacgtcgtcgacgcgccgtcg
ttcgcgcagcgggccgaggaattcgggcgcctggtcgacggcaccccggtcgtcgcccac
aacgccaagttcgacttcacggcgctgaagcgcggctgcaaggcggccggcatcgacgtg
cccgacgtcgcctgggcctgcacctacgaatgggcccggcgcgtgggtctccaagtggag
aactaccgtctgccgacgctggcgagggaggccggggccgccgacttcagccaccacgac
gcctcggacgacgccgtcgcctgcgccgaagtcgcgctgtggctgatgcgcgagcacccc
ggcgacgaaccaacgctcaaccccgtgaagtacacggagaatctgggcatggaaatgggg
atgctcttcggaacacgcctggtgcccatgcggaccacgggccagtcgcaggtcggttcc
ggtggcgcgggccgtcgcaaagcagggagccggcgacggcccggcggcgcgcaggaccgg
cgcgccaagtgggatgcggtcaaggcacccgaggtcatccccgagaagaacgaggacgcc
gaccccgacggactgctctacggccagcgggtgacgctgacgggcgacttcgcgccctac
gacaagggacggctgtgggagctgatcgcgcaggcgggcgcggacatcaacaagggggta
accaagaagacgacgatcctcgtggccggcccgtgggattcgatgacgtcgaaggagaag
aaggcccgcgagtacaaggagaagggccaggacatcgacatttggaatgagaagcagctt
ttcgccgtcctcggattggaagaggaaccgcccttctga
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